RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	NSMCE1	Q8WV22	266 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	PIH1D2	Q8WWB5	315 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	NUS1	Q96E22	293 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	DTD2	Q96FN9	168 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	CRELD1	Q96HD1	420 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	CCDC3	Q9BQI4	270 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	LGR4	Q9BXB1	951 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	PACSIN1	Q9BY11	444 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	TEX101	Q9BY14	249 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	WDR26	Q9H7D7	661 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	CTTNBP2NL	Q9P2B4	639 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	AMACR	Q9UHK6	382 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	GPR34	Q9UPC5	381 aa		11.66	□□□□□ -0.54
KIFC3-222	ENST00000565481	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481		A8MX80	341 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	ZNF487	B1APH4	448 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	MATN3	O15232	486 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	CASC3	O15234	703 aa	Known RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	RRP8	O43159	456 aa	Known RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	CBFA2T2	O43439	604 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	TNF	P01375	233 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	KRT7	P08729	469 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	TMEM253	P0C7T8	217 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	CYP2A6	P11509	494 aa	Predicted RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	MYCLP1	P12525	358 aa	Predicted RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	CES1	P23141	567 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	CCNC	P24863	283 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	NFKBIA	P25963	317 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	IFI16	Q16666	785 aa	Known RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	ARMC12	Q5T9G4	340 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	CRTC1	Q6UUV9	634 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	LRRC69	Q6ZNQ3	347 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	RD3	Q7Z3Z2	195 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	HSD11B1L	Q7Z5J1	315 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	TECPR1	Q7Z6L1	1165 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	VSTM4	Q8IW00	320 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	MAP7D3	Q8IWC1	876 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	PQLC3	Q8N755	202 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	PAF1	Q8N7H5	531 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	OR6C4	Q8NGE1	309 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	PRR11	Q96HE9	360 aa	Predicted RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	SEMA3C	Q99985	751 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	POLR1E	Q9GZS1	481 aa	Known RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	PRORY	Q9H606	182 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	NT5M	Q9NPB1	228 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	MRPL40	Q9NQ50	206 aa	Known RBP	11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	RABGEF1	Q9UJ41	708 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	DOLK	Q9UPQ8	538 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	PCDHGA8	Q9Y5G5	932 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	RAI2	Q9Y5P3	530 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	PIEZO2	Q9H5I5	2752 aa		11.65	□□□□□ -0.54
KIFC3-222	ENST00000565481	COL6A6	A6NMZ7	2263 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	PRSS38	A1L453	326 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	PDE2A	O00408	941 aa	Predicted RBP	11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	NOBOX	O60393	691 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	MTA2	O94776	668 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	PDHA1	P08559	390 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	ETV3	P41162	512 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	MLLT3	P42568	568 aa	Predicted RBP	11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	SSR1	P43307	286 aa	Known RBP	11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	PCBP4	P57723	403 aa	Known RBP	11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	SKOR1	P84550	965 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	GBE1	Q04446	702 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	TLE3	Q04726	772 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	DPT	Q07507	201 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	SLC10A2	Q12908	348 aa	Predicted RBP	11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	TSR1	Q2NL82	804 aa	Known RBP	11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	CERCAM	Q5T4B2	595 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	TIGD7	Q6NT04	549 aa	Predicted RBP	11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481		Q6ZVL8	140 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	USP45	Q70EL2	814 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	TSPAN33	Q86UF1	283 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	VSIG1	Q86XK7	387 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	SPACA3	Q8IXA5	215 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	KCTD6	Q8NC69	237 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	ARRDC2	Q8TBH0	407 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	GPBAR1	Q8TDU6	330 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	CCDC74A	Q96AQ1	378 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	ATXN7L3B	Q96GX2	97 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	TMEM168	Q9H0V1	697 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	CYP4F12	Q9HCS2	524 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	SIRPG	Q9P1W8	387 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	GULP1	Q9UBP9	304 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	APPL1	Q9UKG1	709 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	SATB2	Q9UPW6	733 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481	SSUH2	Q9Y2M2	353 aa		11.64	□□□□□ -0.55
KIFC3-222	ENST00000565481		A0A0J9YYE9	177 aa		11.63	□□□□□ -0.55
KIFC3-222	ENST00000565481		A0A1W2PQM1	296 aa		11.63	□□□□□ -0.55
KIFC3-222	ENST00000565481	CDRT15L2	A8MXV6	281 aa		11.63	□□□□□ -0.55
KIFC3-222	ENST00000565481		D6RAR5	112 aa		11.63	□□□□□ -0.55
KIFC3-222	ENST00000565481	MFAP3L	O75121	409 aa		11.63	□□□□□ -0.55
KIFC3-222	ENST00000565481	SOD1	P00441	154 aa		11.63	□□□□□ -0.55
KIFC3-222	ENST00000565481	PRL	P01236	227 aa		11.63	□□□□□ -0.55
KIFC3-222	ENST00000565481	TRBC1	P01850	177 aa		11.63	□□□□□ -0.55
KIFC3-222	ENST00000565481	FUCA1	P04066	466 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms