RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 NELFEP18615 380 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 ITIH1P19827 911 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 NDUFS1P28331 727 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 EIF5AP63241 154 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 NOTUMQ6P988 496 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 LVRNQ6Q4G3 990 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 OLFML1Q6UWY5 402 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 LAYNQ6UX15 382 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TMEM26Q6ZUK4 368 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PIM3Q86V86 326 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 GALNT15Q8N3T1 639 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PJA1Q8NG27 643 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 METTL2AQ96IZ6 378 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 BDH2Q9BUT1 245 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 NUDT9Q9BW91 350 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CRTAC1Q9NQ79 661 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 HTR3EA5X5Y0 456 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MTX2O75431 263 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 GJB5O95377 273 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CPP00450 1065 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 STATHP02808 62 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 HIST1H2AGP0C0S8 130 aaPredicted RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 HIST1H2ADP20671 130 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MAGEA4P43358 317 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RAD23AP54725 363 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 DEFB103AP81534 67 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CBLBQ13191 982 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 AUHQ13825 339 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 ARL6IP1Q15041 203 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SEC23BQ15437 767 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PDCD4Q53EL6 469 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 DET1Q7L5Y6 550 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 OTOAQ7RTW8 1153 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SLC22A15Q8IZD6 547 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 OR10Q1Q8NGQ4 319 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ING5Q8WYH8 240 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ZFYVE19Q96K21 471 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 HIST1H2AHQ96KK5 128 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 FBXL18Q96ME1 805 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 NR1H4Q96RI1 486 aaPredicted RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 HIST1H2AJQ99878 128 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 H2AFJQ9BTM1 129 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ADAMTS10Q9H324 1103 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ZFYVE28Q9HCC9 887 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SYTL2Q9HCH5 934 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 DSPP15924 2871 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 ZNF487B1APH4 448 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 LIASO43766 372 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 AIREO43918 545 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RBP1P09455 135 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PSMC3P17980 439 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 EPHB2P29323 1055 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 POU5F1BQ06416 359 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 KLF1Q13351 362 aaPredicted RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 DPYSL3Q14195 570 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 POLD3Q15054 466 aaPredicted RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 TFDP3Q5H9I0 405 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PAGE2Q7Z2X7 111 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 NLRP14Q86W24 1093 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ZNF333Q96JL9 665 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MYOCQ99972 504 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ZBED2Q9BTP6 218 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 UNC93B1Q9H1C4 597 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 COQ4Q9Y3A0 265 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ATG4BQ9Y4P1 393 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MYO10Q9HD67 2058 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 hCG_1818297A0A087WSY0 165 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 HBP1O60381 514 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PRLP01236 227 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SDC4P31431 198 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 VEGFBP49765 207 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MEF2AQ02078 507 aaPredicted RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 ZNF33BQ06732 778 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 FCHO2Q0JRZ9 810 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 KRT72Q14CN4 511 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PITRM1Q5JRX3 1037 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 BORAQ6PGQ7 559 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ZNF555Q8NEP9 628 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PYROXD1Q8WU10 500 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SORCS1Q8WY21 1168 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MYLPFQ96A32 169 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RILPQ96NA2 401 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SCGB3A2Q96PL1 93 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PLEKHG4BQ96PX9 1271 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TMEM106CQ9BVX2 250 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TM6SF2Q9BZW4 377 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TRABDQ9H4I3 376 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SIP14410 1827 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 WDR81Q562E7 1941 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 IGKV6D-21A0A0A0MT36 114 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 METTL21EPA6NDL7 271 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ZBBXA8MT70 800 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CAPN14A8MX76 684 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ODC1P11926 461 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TGM2P21980 687 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MMP8P22894 467 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 EDNRBP24530 442 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CYP4F8P98187 520 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ECT2LQ008S8 904 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 VPS26BQ4G0F5 336 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms