RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 USP45Q70EL2 814 aa15.02■□□□□ -0
SPG7-210ENST00000564409 TAF8Q7Z7C8 310 aa15.02■□□□□ -0
SPG7-210ENST00000564409 CLEC14AQ86T13 490 aa15.02■□□□□ -0
SPG7-210ENST00000564409 RAVER1Q8IY67 606 aaKnown RBP15.02■□□□□ -0
SPG7-210ENST00000564409 PGBD5Q8N414 524 aa15.02■□□□□ -0
SPG7-210ENST00000564409 FAM46DQ8NEK8 389 aa15.02■□□□□ -0
SPG7-210ENST00000564409 KIAA1524Q8TCG1 905 aa15.02■□□□□ -0
SPG7-210ENST00000564409 PDCD6IPQ8WUM4 868 aaKnown RBP15.02■□□□□ -0
SPG7-210ENST00000564409 CPLX3Q8WVH0 158 aa15.02■□□□□ -0
SPG7-210ENST00000564409 OR1E3Q8WZA6 343 aa15.02■□□□□ -0
SPG7-210ENST00000564409 CCDC74AQ96AQ1 378 aa15.02■□□□□ -0
SPG7-210ENST00000564409 NUS1Q96E22 293 aa15.02■□□□□ -0
SPG7-210ENST00000564409 CRELD1Q96HD1 420 aa15.02■□□□□ -0
SPG7-210ENST00000564409 TMEM74Q96NL1 305 aa15.02■□□□□ -0
SPG7-210ENST00000564409 GFM1Q96RP9 751 aaKnown RBP15.02■□□□□ -0
SPG7-210ENST00000564409 MCCC1Q96RQ3 725 aaPredicted RBP15.02■□□□□ -0
SPG7-210ENST00000564409 TEX101Q9BY14 249 aa15.02■□□□□ -0
SPG7-210ENST00000564409 FGF22Q9HCT0 170 aa15.02■□□□□ -0
SPG7-210ENST00000564409 SIRPGQ9P1W8 387 aa15.02■□□□□ -0
SPG7-210ENST00000564409 DNPEPQ9ULA0 475 aa15.02■□□□□ -0
SPG7-210ENST00000564409 RAI2Q9Y5P3 530 aa15.02■□□□□ -0
SPG7-210ENST00000564409 PRSS38A1L453 326 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 CDRT15L2A8MXV6 281 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 D6RAR5 112 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 ZW10O43264 779 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 NUDT21O43809 227 aaKnown RBP15.01□□□□□ -0.01
SPG7-210ENST00000564409 PYGLP06737 847 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 ITGA2BP08514 1039 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 KRT7P08729 469 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 SKOR1P84550 965 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 DPTQ07507 201 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 ARHGEF7Q14155 803 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 PAFAH1B3Q15102 231 aaKnown RBP15.01□□□□□ -0.01
SPG7-210ENST00000564409 CNGA3Q16281 694 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 IFI16Q16666 785 aaKnown RBP15.01□□□□□ -0.01
SPG7-210ENST00000564409 CERCAMQ5T4B2 595 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 TXNRD3NBQ6F5E7 133 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 ALG1LQ6GMV1 187 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 NLRP8Q86W28 1048 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 TMEM159Q96B96 161 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 DTD2Q96FN9 168 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 PRR11Q96HE9 360 aaPredicted RBP15.01□□□□□ -0.01
SPG7-210ENST00000564409 NSMCE3Q96MG7 304 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 BBC3Q96PG8 261 aaPredicted RBP15.01□□□□□ -0.01
SPG7-210ENST00000564409 TSGA13Q96PP4 275 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 ZNF670Q9BS34 389 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 POLR1EQ9GZS1 481 aaKnown RBP15.01□□□□□ -0.01
SPG7-210ENST00000564409 LRRN3Q9H3W5 708 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 CYP4F12Q9HCS2 524 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 TRNAU1APQ9NX07 287 aaKnown RBP15.01□□□□□ -0.01
SPG7-210ENST00000564409 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
SPG7-210ENST00000564409 A8MX80 341 aa15□□□□□ -0.01
SPG7-210ENST00000564409 PLD2O14939 933 aa15□□□□□ -0.01
SPG7-210ENST00000564409 GYPCP04921 128 aa15□□□□□ -0.01
SPG7-210ENST00000564409 H2AFZP0C0S5 128 aa15□□□□□ -0.01
SPG7-210ENST00000564409 ZNF30P17039 623 aa15□□□□□ -0.01
SPG7-210ENST00000564409 MX2P20592 715 aa15□□□□□ -0.01
SPG7-210ENST00000564409 CA4P22748 312 aa15□□□□□ -0.01
SPG7-210ENST00000564409 IL4RP24394 825 aa15□□□□□ -0.01
SPG7-210ENST00000564409 CCNCP24863 283 aa15□□□□□ -0.01
SPG7-210ENST00000564409 CCKBRP32239 447 aa15□□□□□ -0.01
SPG7-210ENST00000564409 GARSP41250 739 aaKnown RBP15□□□□□ -0.01
SPG7-210ENST00000564409 SSR1P43307 286 aaKnown RBP15□□□□□ -0.01
SPG7-210ENST00000564409 ARSEP51690 589 aa15□□□□□ -0.01
SPG7-210ENST00000564409 PDX1P52945 283 aa15□□□□□ -0.01
SPG7-210ENST00000564409 GALNT2Q10471 571 aa15□□□□□ -0.01
SPG7-210ENST00000564409 TRAF2Q12933 501 aa15□□□□□ -0.01
SPG7-210ENST00000564409 CLPPQ16740 277 aaPredicted RBP15□□□□□ -0.01
SPG7-210ENST00000564409 C14orf28Q4W4Y0 310 aa15□□□□□ -0.01
SPG7-210ENST00000564409 CRTC1Q6UUV9 634 aa15□□□□□ -0.01
SPG7-210ENST00000564409 H2AFVQ71UI9 128 aa15□□□□□ -0.01
SPG7-210ENST00000564409 CCNJLQ8IV13 435 aa15□□□□□ -0.01
SPG7-210ENST00000564409 ZNF564Q8TBZ8 553 aaPredicted RBP15□□□□□ -0.01
SPG7-210ENST00000564409 GPBAR1Q8TDU6 330 aa15□□□□□ -0.01
SPG7-210ENST00000564409 SNRNP27Q8WVK2 155 aaKnown RBP15□□□□□ -0.01
SPG7-210ENST00000564409 CTNNBL1Q8WYA6 563 aaPredicted RBP15□□□□□ -0.01
SPG7-210ENST00000564409 MAML1Q92585 1016 aa15□□□□□ -0.01
SPG7-210ENST00000564409 WBP1Q96G27 269 aa15□□□□□ -0.01
SPG7-210ENST00000564409 BTBD6Q96KE9 485 aa15□□□□□ -0.01
SPG7-210ENST00000564409 LGR4Q9BXB1 951 aa15□□□□□ -0.01
SPG7-210ENST00000564409 GSDMCQ9BYG8 508 aa15□□□□□ -0.01
SPG7-210ENST00000564409 TMEM168Q9H0V1 697 aa15□□□□□ -0.01
SPG7-210ENST00000564409 SYNDIG1Q9H7V2 258 aa15□□□□□ -0.01
SPG7-210ENST00000564409 IFNKQ9P0W0 207 aa15□□□□□ -0.01
SPG7-210ENST00000564409 NENFQ9UMX5 172 aa15□□□□□ -0.01
SPG7-210ENST00000564409 ZFC3H1O60293 1989 aaKnown RBP14.99□□□□□ -0.01
SPG7-210ENST00000564409 SCN8AQ9UQD0 1980 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 A0A1W2PNU3 283 aaPredicted RBP14.99□□□□□ -0.01
SPG7-210ENST00000564409 CAPN8A6NHC0 703 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 MATN3O15232 486 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 NOBOXO60393 691 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 PROSCO94903 275 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 TNFSF15O95150 251 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 RPLP0P05388 317 aaKnown RBP14.99□□□□□ -0.01
SPG7-210ENST00000564409 CCNB1P14635 433 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 MAN1A1P33908 653 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 INHBCP55103 352 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 RPL26P61254 145 aaKnown RBP14.99□□□□□ -0.01
SPG7-210ENST00000564409 CXADRP78310 365 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 CCL7P80098 99 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms