RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 CNTD1Q8N815 330 aa19.22■□□□□ 0.67
CBFB-204ENST00000563939 FAM181AQ8N9Y4 354 aa19.22■□□□□ 0.67
CBFB-204ENST00000563939 ACRBPQ8NEB7 543 aa19.22■□□□□ 0.67
CBFB-204ENST00000563939 LPCAT1Q8NF37 534 aa19.22■□□□□ 0.67
CBFB-204ENST00000563939 FUBP1Q96AE4 644 aaKnown RBP19.22■□□□□ 0.67
CBFB-204ENST00000563939 CALR3Q96L12 384 aaKnown RBP19.22■□□□□ 0.67
CBFB-204ENST00000563939 MCCC1Q96RQ3 725 aaPredicted RBP19.22■□□□□ 0.67
CBFB-204ENST00000563939 LRRC61Q9BV99 259 aa19.22■□□□□ 0.67
CBFB-204ENST00000563939 TMEM121BQ9BXQ6 578 aaPredicted RBP19.22■□□□□ 0.67
CBFB-204ENST00000563939 WDR26Q9H7D7 661 aa19.22■□□□□ 0.67
CBFB-204ENST00000563939 IMPACTQ9P2X3 320 aa19.22■□□□□ 0.67
CBFB-204ENST00000563939 REXO2Q9Y3B8 237 aaKnown RBP19.22■□□□□ 0.67
CBFB-204ENST00000563939 SHROOM3Q8TF72 1996 aa19.22■□□□□ 0.67
CBFB-204ENST00000563939 TDRD6O60522 2096 aaKnown RBP19.21■□□□□ 0.67
CBFB-204ENST00000563939 A0A0J9YYE9 177 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 CPED1A4D0V7 1026 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 PDE2AO00408 941 aaPredicted RBP19.21■□□□□ 0.67
CBFB-204ENST00000563939 TPP1O14773 563 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 YY2O15391 372 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 TRBC1P01850 177 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 KELP23276 732 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 TRIM23P36406 574 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 MARCKSL1P49006 195 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 ELOCQ15369 112 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 TAZQ16635 292 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 LRRC66Q68CR7 880 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 NYAP1Q6ZVC0 841 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 KDELC2Q7Z4H8 507 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 CBARPQ8N350 705 aaPredicted RBP19.21■□□□□ 0.67
CBFB-204ENST00000563939 OR56A4Q8NGH8 313 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 KIAA1524Q8TCG1 905 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 SCG3Q8WXD2 468 aaKnown RBP19.21■□□□□ 0.67
CBFB-204ENST00000563939 KRT35Q92764 455 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 P3H4Q92791 437 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 OLFM3Q96PB7 478 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 HEMGNQ9BXL5 484 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 TDRD1Q9BXT4 1180 aaKnown RBP19.21■□□□□ 0.67
CBFB-204ENST00000563939 LACRTQ9GZZ8 138 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 CLPBQ9H078 707 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 ABCG4Q9H172 646 aa19.21■□□□□ 0.67
CBFB-204ENST00000563939 COL5A1P20908 1838 aaPredicted RBP19.21■□□□□ 0.67
CBFB-204ENST00000563939 TMEM8BA6NDV4 472 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 TMEM202A6NGA9 273 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 LMO7DNF2Z398 122 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 PSMD11O00231 422 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 PRLP01236 227 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 HOXC4P09017 264 aaPredicted RBP19.2■□□□□ 0.66
CBFB-204ENST00000563939 CDC25BP30305 580 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 RPL26P61254 145 aaKnown RBP19.2■□□□□ 0.66
CBFB-204ENST00000563939 SKOR1P84550 965 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 CDKN3Q16667 212 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 HES3Q5TGS1 186 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 ESRP1Q6NXG1 681 aaKnown RBP19.2■□□□□ 0.66
CBFB-204ENST00000563939 NT5DC3Q86UY8 548 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 PELI3Q8N2H9 469 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 FSTL5Q8N475 847 aaPredicted RBP19.2■□□□□ 0.66
CBFB-204ENST00000563939 KDF1Q8NAX2 398 aaPredicted RBP19.2■□□□□ 0.66
CBFB-204ENST00000563939 EXD1Q8NHP7 514 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 TFB1MQ8WVM0 346 aaKnown RBP19.2■□□□□ 0.66
CBFB-204ENST00000563939 ZCCHC14Q8WYQ9 949 aaKnown RBP19.2■□□□□ 0.66
CBFB-204ENST00000563939 GLMNQ92990 594 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 DTD2Q96FN9 168 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 RBM41Q96IZ5 413 aaKnown RBP19.2■□□□□ 0.66
CBFB-204ENST00000563939 TBATAQ96M53 351 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 RBM15Q96T37 977 aaKnown RBP eCLIP19.2■□□□□ 0.66
CBFB-204ENST00000563939 LGR4Q9BXB1 951 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 ADGRE3Q9BY15 652 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 PHPT1Q9NRX4 125 aaPredicted RBP19.2■□□□□ 0.66
CBFB-204ENST00000563939 NCKIPSDQ9NZQ3 722 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 GULP1Q9UBP9 304 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 CD84Q9UIB8 345 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 RPL26L1Q9UNX3 145 aaKnown RBP19.2■□□□□ 0.66
CBFB-204ENST00000563939 AKAP13Q12802 2813 aa19.2■□□□□ 0.66
CBFB-204ENST00000563939 FRYQ5TBA9 3013 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 TRABD2BA6NFA1 517 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 GOLGA6L6A8MZA4 724 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 CELA2BP08218 269 aaPredicted RBP19.19■□□□□ 0.66
CBFB-204ENST00000563939 MMP2P08253 660 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 PECAM1P16284 738 aaPredicted RBP19.19■□□□□ 0.66
CBFB-204ENST00000563939 TGM2P21980 687 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 RPIAP49247 311 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 VAV2P52735 878 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 KIAA1024LP59773 190 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 PTSQ03393 145 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 ADCY2Q08462 1091 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 TARDBPQ13148 414 aaKnown RBP eCLIP19.19■□□□□ 0.66
CBFB-204ENST00000563939 NR0B2Q15466 257 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 CCDC181Q5TID7 509 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 RAET1GQ6H3X3 334 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 RFLNAQ6ZTI6 216 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 ZC3H18Q86VM9 953 aaKnown RBP19.19■□□□□ 0.66
CBFB-204ENST00000563939 OR1E3Q8WZA6 343 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 HAUS1Q96CS2 278 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 MLPHQ9BV36 600 aaPredicted RBP19.19■□□□□ 0.66
CBFB-204ENST00000563939 USP29Q9HBJ7 922 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 CYP4F12Q9HCS2 524 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 MRPL40Q9NQ50 206 aaKnown RBP19.19■□□□□ 0.66
CBFB-204ENST00000563939 ZMIZ1Q9ULJ6 1067 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 ANKRD36A6QL64 1941 aa19.19■□□□□ 0.66
CBFB-204ENST00000563939 hCG_1818297A0A087WSY0 165 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms