RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 HEPHL1Q6MZM0 1159 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 Q6ZPB1 254 aaPredicted RBP10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 NRROSQ86YC3 692 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 UNC45BQ8IWX7 931 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 KIAA0895Q8NCT3 520 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 NCSTNQ92542 709 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 SAAL1Q96ER3 474 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 FER1L6-AS2Q96M78 137 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 FCRL4Q96PJ5 515 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 FAM49BQ9NUQ9 324 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 COQ3Q9NZJ6 369 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 HECAQ9UBI9 543 aaPredicted RBP10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 HS3ST2Q9Y278 367 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 ITM2BQ9Y287 266 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 ZNF835Q9Y2P0 537 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 OR1A2Q9Y585 309 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 DOCK4Q8N1I0 1966 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 RYR1P21817 5038 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 CADP27708 2225 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 HEATR5AQ86XA9 2040 aa10.62□□□□□ -0.71
HDGFL3-204ENST00000563790 CCDC78A2IDD5 438 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 TRIM64A6NGJ6 449 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 TRIM64BA6NI03 449 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 SNPHO15079 494 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 DTNBO60941 627 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 TOXO94900 526 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 CST3P01034 146 aaPredicted RBP10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 RAB40ALP0C0E4 278 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 FAM157CP0CG43 387 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 SRCP12931 536 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 UNGP13051 313 aaPredicted RBP10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 MST1P26927 711 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 ADORA2BP29275 332 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 FASLGP48023 281 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 PDE1BQ01064 536 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 SPOCD1Q6ZMY3 1216 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 ZNF761Q86XN6 746 aaPredicted RBP10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 SLC9A9Q8IVB4 645 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 CRYBG2Q8N1P7 616 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 ENDOVQ8N8Q3 282 aaKnown RBP10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 C12orf29Q8N999 325 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 OR56A4Q8NGH8 313 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 SNX29Q8TEQ0 813 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 WASF1Q92558 559 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 ALG14Q96F25 216 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 FIZ1Q96SL8 496 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 MMTAG2Q9BU76 263 aaKnown RBP10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 SMYD3Q9H7B4 428 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 ABI3Q9P2A4 366 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 ROS1P08922 2347 aa10.61□□□□□ -0.71
HDGFL3-204ENST00000563790 MED12Q93074 2177 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 NPHP3-ACAD11A0A0J9YXS1 232 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 TMEM202A6NGA9 273 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 CLDN4O14493 209 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 TNFRSF10CO14798 259 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 SHOX2O60902 331 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 GADD45BO75293 160 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 STAU1O95793 577 aaKnown RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 LDHAP00338 332 aaKnown RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 PYGMP11217 842 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 ZNF131P52739 623 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 EMP3P54852 163 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 LRRC14Q15048 493 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 KLHL40Q2TBA0 621 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 FOXD4L6Q3SYB3 417 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 CHRFAM7AQ494W8 412 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 UBAP2Q5T6F2 1119 aaKnown RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 PRSS57Q6UWY2 283 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 FOXD4L3Q6VB84 417 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 MRGPREQ86SM8 312 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 CXorf67Q86X51 503 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 RAB43Q86YS6 212 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 ARHGEF26Q96DR7 871 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 ZMYND19Q96E35 227 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 ZNF274Q96GC6 653 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 MAGEB10Q96LZ2 347 aaPredicted RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 IP6K3Q96PC2 410 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 HS3ST6Q96QI5 342 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 DMRTA2Q96SC8 542 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 SLC38A3Q99624 504 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 NDC1Q9BTX1 674 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 NLNQ9BYT8 704 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 NDFIP2Q9NV92 336 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 ODF2LQ9ULJ1 636 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 L3MBTL1Q9Y468 752 aa10.6□□□□□ -0.71
HDGFL3-204ENST00000563790 NKX2-6A6NCS4 301 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 AREL1O15033 823 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 THAP12O43422 761 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 PRAMEF2O60811 474 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 CTDNEP1O95476 244 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 IGHEP01854 428 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 XBP1P17861 261 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 CD53P19397 219 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 MCM7P33993 719 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 DMTNQ08495 405 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 TSR1Q2NL82 804 aaKnown RBP10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 WSCD2Q2TBF2 565 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 PRAMEF17Q5VTA0 474 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms