RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 SP110Q9HB58 689 aa9.53□□□□□ -0.88
RPAP1-205ENST00000563293 USP29Q9HBJ7 922 aa9.53□□□□□ -0.88
RPAP1-205ENST00000563293 PCDH9Q9HC56 1237 aa9.53□□□□□ -0.88
RPAP1-205ENST00000563293 SAE1Q9UBE0 346 aaPredicted RBP9.53□□□□□ -0.88
RPAP1-205ENST00000563293 U3KQA8 63 aa9.53□□□□□ -0.88
RPAP1-205ENST00000563293 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TBC1D3DA0A087WVF3 549 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TBC1D3IA0A087WXS9 549 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TBC1D3EA0A087X179 549 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TBC1D3KA0A087X1G2 549 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 GOLGA6CA6NDK9 693 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 GOLGA6BA6NDN3 693 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TBC1D3FA6NER0 549 aaPredicted RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TBC1D3LB9A6J9 549 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 YKT6O15498 198 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 FFAR2O15552 330 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 KCNN4O15554 427 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 MAFKO60675 156 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 PRAMEF11O60813 436 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 CSO75390 466 aaKnown RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 NEBLO76041 1014 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 DXOO77932 396 aaKnown RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 KRT14P02533 472 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TBC1D3HP0C7X1 549 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 GOLGA6DP0CG33 693 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 ITIH2P19823 946 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 DGKAP23743 735 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 PTGIRP43119 386 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 LSSP48449 732 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 STK19P49842 368 aaPredicted RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 CSRP3P50461 194 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 E2F1Q01094 437 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 CAV1Q03135 178 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 PTK6Q13882 451 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 LINC00303Q3SY05 128 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TEX44Q53QW1 395 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 BROXQ5VW32 411 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TBC1D3GQ6DHY5 549 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 ITPRIPL1Q6GPH6 555 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TBC1D3CQ6IPX1 549 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 CXorf57Q6NSI4 855 aaKnown RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TTC27Q6P3X3 843 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 NPNTQ6UXI9 565 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 ZNF354CQ86Y25 554 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 JAMLQ86YT9 394 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 IFT20Q8IY31 132 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TBC1D3Q8IZP1 549 aaPredicted RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 APCDD1Q8J025 514 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TEX26Q8N6G2 289 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 MFSD2AQ8NA29 543 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 MYRIPQ8NFW9 859 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 MAML1Q92585 1016 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 PTPRN2Q92932 1015 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 HMCESQ96FZ2 354 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 PRR11Q96HE9 360 aaPredicted RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 CELF6Q96J87 481 aaKnown RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 RPL10LQ96L21 214 aaKnown RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 ERP44Q9BS26 406 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 FEM1AQ9BSK4 669 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TMEM121Q9BTD3 319 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 TSPYL1Q9H0U9 437 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 NOL6Q9H6R4 1146 aaKnown RBP9.52□□□□□ -0.89
RPAP1-205ENST00000563293 POLR1BQ9H9Y6 1135 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 ATP13A1Q9HD20 1204 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 FAM114A2Q9NRY5 505 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 GOLGA6AQ9NYA3 693 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 IL17BQ9UHF5 180 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 VPS28Q9UK41 221 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 SARDHQ9UL12 918 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 FZD4Q9ULV1 537 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 SCML1Q9UN30 329 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 ERVW-1Q9UQF0 538 aa9.52□□□□□ -0.89
RPAP1-205ENST00000563293 LRRK2Q5S007 2527 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 NBASA2RRP1 2371 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 K7ENP7 123 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 PSMD3O43242 534 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 CTIFO43310 598 aaKnown RBP9.51□□□□□ -0.89
RPAP1-205ENST00000563293 RAD51CO43502 376 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 ASLP04424 464 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 CCNB1P14635 433 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 RBL1P28749 1068 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 FDFT1P37268 417 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 KCNJ1P48048 391 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 IRAK1P51617 712 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 CLCN6P51797 869 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 DAB2P98082 770 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 NFATC3Q12968 1075 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 CUL1Q13616 776 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 PRPSAP1Q14558 356 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 PARP6Q2NL67 630 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 RALGPS1Q5JS13 557 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 TEX35Q5T0J7 233 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 MARC1Q5VT66 337 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 RNF219Q5W0B1 726 aaPredicted RBP9.51□□□□□ -0.89
RPAP1-205ENST00000563293 NAPEPLDQ6IQ20 393 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 INO80CQ6PI98 192 aaPredicted RBP9.51□□□□□ -0.89
RPAP1-205ENST00000563293 CEP128Q6ZU80 1094 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 FAM71DQ8N9W8 422 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 KDM1BQ8NB78 822 aa9.51□□□□□ -0.89
RPAP1-205ENST00000563293 NOA1Q8NC60 698 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms