RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 RPS27LQ71UM5 84 aaKnown RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 NECAB2Q7Z6G3 386 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 MFN1Q8IWA4 741 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 DDI1Q8WTU0 396 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 WDR55Q9H6Y2 383 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 POLR3BQ9NW08 1133 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 CARNS1A5YM72 827 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 A8MT66 165 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 MEI4A8MW99 385 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 NCF2P19878 526 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-203ENST00000563226 CES1P23141 567 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 ERVFC1P60507 584 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 PRKAA1Q13131 559 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 E2F5Q15329 346 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 TBCCQ15814 346 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 INO80DQ53TQ3 878 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-203ENST00000563226 TRIM67Q6ZTA4 783 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 PHTF2Q8N3S3 785 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 POU5F2Q8N7G0 328 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 OR6K2Q8NGY2 324 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 MAGEC3Q8TD91 643 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 SCG3Q8WXD2 468 aaKnown RBP19.12■□□□□ 0.65
SMPD3-203ENST00000563226 TM6SF2Q9BZW4 377 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 ALG9Q9H6U8 611 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 SORCS3Q9UPU3 1222 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 TMEM233B4DJY2 109 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 SPECC1L-ADORA2AF8WAN1 911 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 NEMP1O14524 444 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 SMAD6O43541 496 aaKnown RBP19.12■□□□□ 0.65
SMPD3-203ENST00000563226 ZBTB14O43829 449 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 MYL4P12829 197 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 TFEBP19484 476 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 PMLP29590 882 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 CDC25CP30307 473 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 HELZP42694 1942 aaKnown RBP19.12■□□□□ 0.65
SMPD3-203ENST00000563226 DNAJB13P59910 316 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 SLC7A9P82251 487 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 ACAP2Q15057 778 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 AFTPHQ6ULP2 937 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 TPGS1Q6ZTW0 290 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 DCAF4L2Q8NA75 395 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 KREMEN2Q8NCW0 462 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 PTERQ96BW5 349 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 CORO1BQ9BR76 489 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 AARSD1Q9BTE6 412 aaKnown RBP19.12■□□□□ 0.65
SMPD3-203ENST00000563226 BPIFA1Q9NP55 256 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 HCFC1R1Q9NWW0 138 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 FKBPLQ9UIM3 349 aa19.12■□□□□ 0.65
SMPD3-203ENST00000563226 LSM7Q9UK45 103 aaKnown RBP19.12■□□□□ 0.65
SMPD3-203ENST00000563226 MYOFQ9NZM1 2061 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 C2orf81A6NN90 581 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 HIDE1A8MVS5 230 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 HDAC3O15379 428 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 CCL16O15467 120 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 PEX11AO75192 247 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 WFS1O76024 890 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 PRAMEF12O95522 483 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 HNRNPLP14866 589 aaKnown RBP eCLIP19.11■□□□□ 0.65
SMPD3-203ENST00000563226 PSMA3P25788 255 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 CCR2P41597 374 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 SEL1L3Q68CR1 1132 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 KLC3Q6P597 504 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 HTR3DQ70Z44 454 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 SDCCAG8Q86SQ7 713 aaPredicted RBP19.11■□□□□ 0.65
SMPD3-203ENST00000563226 ISCA2Q86U28 154 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 CLP1Q92989 425 aaKnown RBP19.11■□□□□ 0.65
SMPD3-203ENST00000563226 NUF2Q9BZD4 464 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 FNDC3AQ9Y2H6 1198 aaKnown RBP19.11■□□□□ 0.65
SMPD3-203ENST00000563226 SH3BP1Q9Y3L3 701 aa19.11■□□□□ 0.65
SMPD3-203ENST00000563226 UBA6A0AVT1 1052 aaPredicted RBP19.1■□□□□ 0.65
SMPD3-203ENST00000563226 LCHNA4D1U4 455 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 NPHS1O60500 1241 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 ENTPD5O75356 428 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 LPOP22079 712 aaPredicted RBP19.1■□□□□ 0.65
SMPD3-203ENST00000563226 EPHA3P29320 983 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 FAM219BQ5XKK7 198 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 PIANPQ8IYJ0 282 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 TTC30BQ8N4P2 665 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 LPGAT1Q92604 370 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 MCUR1Q96AQ8 359 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 PHF21BQ96EK2 531 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 TCF25Q9BQ70 676 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 SLC46A2Q9BY10 475 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 ADGRE3Q9BY15 652 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 TCF7L2Q9NQB0 619 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 PLA2G4CQ9UP65 541 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 MED16Q9Y2X0 877 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 PCDHB9Q9Y5E1 797 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 DCXO43602 365 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 FZD6O60353 706 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 IPO13O94829 963 aaKnown RBP19.1■□□□□ 0.65
SMPD3-203ENST00000563226 ADH1AP07327 375 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 RBP1P09455 135 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 CD1DP15813 335 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 SUOXP51687 545 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 LMAN2Q12907 356 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 PSAPL1Q6NUJ1 521 aa19.1■□□□□ 0.65
SMPD3-203ENST00000563226 PIWIL4Q7Z3Z4 852 aaKnown RBP19.1■□□□□ 0.65
SMPD3-203ENST00000563226 TMPRSS6Q8IU80 811 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms