RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ATP6V0D1P61421 351 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 FKBP1BP68106 108 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 ITKQ08881 620 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 RALGDSQ12967 914 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 TUSC3Q13454 348 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 INPP5AQ14642 412 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 GPR158Q5T848 1215 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
USB1-207ENST00000563149 KRT80Q6KB66 452 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 TMEM207Q6UWW9 146 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 CYHR1Q6ZMK1 362 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 AMIGO2Q86SJ2 522 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 DRAXINQ8NBI3 349 aaPredicted RBP13.1□□□□□ -0.31
USB1-207ENST00000563149 OR6P1Q8NGX9 317 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 EZH1Q92800 747 aaPredicted RBP13.1□□□□□ -0.31
USB1-207ENST00000563149 HDAC10Q969S8 669 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 SUSD3Q96L08 255 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 SEMA6AQ9H2E6 1030 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 RGS18Q9NS28 235 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 PTBP2Q9UKA9 531 aaKnown RBP13.1□□□□□ -0.31
USB1-207ENST00000563149 A0A0J9YYE9 177 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 BMP10O95393 424 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 GLP2RO95838 553 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 MOCS2O96007 188 aaPredicted RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 C7P10643 843 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 HDCP19113 662 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 IL10P22301 178 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 YWHAQP27348 245 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 MRPL19P49406 292 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 CDK9P50750 372 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 CDKN2DP55273 166 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 MGAT3Q09327 533 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 MTX3Q5HYI7 312 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 NOMO2Q5JPE7 1267 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 PIK3R6Q5UE93 754 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 MON1AQ86VX9 555 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 ZNF683Q8IZ20 524 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 MIER2Q8N344 545 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 ATP6V0D2Q8N8Y2 350 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 B4GALNT2Q8NHY0 566 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 LZICQ8WZA0 190 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 RMND5BQ96G75 393 aaPredicted RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 FEM1CQ96JP0 617 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 TMEM209Q96SK2 561 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 SLC29A1Q99808 456 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 MTG1Q9BT17 334 aaPredicted RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 TFB2MQ9H5Q4 396 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 AKTIPQ9H8T0 292 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 SP110Q9HB58 689 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 CIDEBQ9UHD4 219 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 SCML2Q9UQR0 700 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 TANC1Q9C0D5 1861 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 IGLV3-10A0A075B6K4 115 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 A0A1W2PQH9 124 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 AZIN1O14977 448 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 TRMUO75648 421 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 CSPG5O95196 566 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 ALDOCP09972 364 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 SPATA31D3P0C874 917 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 CDH2P19022 906 aaPredicted RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 HLA-DPA1P20036 260 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 OGNP20774 298 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 PRKCQQ04759 706 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 IL10RBQ08334 325 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 GRIK2Q13002 908 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 KIF19Q2TAC6 998 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 NHSL2Q5HYW2 709 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 SIRPB2Q5JXA9 342 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 KANK2Q63ZY3 851 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 CLEC6AQ6EIG7 209 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 LCN8Q6JVE9 175 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 MRNIPQ6NTE8 343 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 CYP2R1Q6VVX0 501 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 SPATA31D4Q6ZUB0 917 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 RPS27LQ71UM5 84 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 CAMK1DQ8IU85 385 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 ERI1Q8IV48 349 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 NUP93Q8N1F7 819 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 PPWD1Q96BP3 646 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 HMCESQ96FZ2 354 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 SLC45A3Q96JT2 553 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 NOL11Q9H8H0 719 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 CLK4Q9HAZ1 481 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 NMUR1Q9HB89 426 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 OLAHQ9NV23 265 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 ACTR3BQ9P1U1 418 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 RSL24D1Q9UHA3 163 aaKnown RBP13.09□□□□□ -0.31
USB1-207ENST00000563149 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
USB1-207ENST00000563149 TYW5A2RUC4 315 aaKnown RBP13.08□□□□□ -0.32
USB1-207ENST00000563149 TRIM64CA6NLI5 447 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 ZNF839A8K0R7 811 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 H3BSA7 217 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 J3KR12 359 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 LDB2O43679 373 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 CDK14O94921 469 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 EPOP01588 193 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 CHRNA1P02708 482 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 FGF1P05230 155 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 ATXN1LP0C7T5 689 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms