RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	RCE1	Q9Y256	329 aa		4.28	□□□□□ -1.72
LRRC28-222	ENST00000561431	MYH13	Q9UKX3	1938 aa		4.28	□□□□□ -1.72
LRRC28-222	ENST00000561431	MAST2	Q6P0Q8	1798 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	OTOF	Q9HC10	1997 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	EMSY	Q7Z589	1322 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	MANSC4	A6NHS7	340 aa	Predicted RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	LRRC3C	A6NJW4	275 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	SAC3D1	A6NKF1	404 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	CASQ2	O14958	399 aa	Predicted RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	CTAGE5	O15320	804 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	E2F6	O75461	281 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	CNTN5	O94779	1100 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	HSPA4L	O95757	839 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	SLC4A1	P02730	911 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	APOA4	P06727	396 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	CYP21A2	P08686	494 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	CD63	P08962	238 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	CYP2A6	P11509	494 aa	Predicted RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	TGM2	P21980	687 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	CYP3A7	P24462	503 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	PRKCH	P24723	683 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	GSTM2	P28161	218 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	ADORA1	P30542	326 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	ABCD1	P33897	745 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	PGM1	P36871	562 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	IL15	P40933	162 aa	Predicted RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	OAZ1	P54368	228 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	AKAP17A	Q02040	695 aa	Known RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	TLE2	Q04725	743 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	TFCP2	Q12800	502 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	BECN1	Q14457	450 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	KRTCAP3	Q53RY4	240 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	RAPH1	Q70E73	1250 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	RD3	Q7Z3Z2	195 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	SLC9B2	Q86UD5	537 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNF75CP	Q92670	426 aa	Predicted RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNF845	Q96IR2	970 aa	Predicted RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	PRMT6	Q96LA8	375 aa	Predicted RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	C5orf34	Q96MH7	638 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	PPP1R10	Q96QC0	940 aa	Known RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	TWNK	Q96RR1	684 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	SDF4	Q9BRK5	362 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	GPATCH1	Q9BRR8	931 aa	Known RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	TXLNGY	Q9BZA5	131 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	GPR63	Q9BZJ6	419 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	ACAD9	Q9H845	621 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	XAB2	Q9HCS7	855 aa	Known RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	OLA1	Q9NTK5	396 aa	Known RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	HPF1	Q9NWY4	346 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	CHCHD3	Q9NX63	227 aa	Known RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	ALKBH4	Q9NXW9	302 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	AIPL1	Q9NZN9	384 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	CGN	Q9P2M7	1197 aa	Known RBP	4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	RFX7	Q2KHR2	1363 aa		4.27	□□□□□ -1.73
LRRC28-222	ENST00000561431	SALL1	Q9NSC2	1324 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	CCDC196	A0A1B0GTZ2	297 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431		A0A1B0GUL7	405 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	CLRN2	A0PK11	232 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431		A6NLC8	198 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	DSCR3	O14972	297 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	INPPL1	O15357	1258 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	NFATC1	O95644	943 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	GUCA1C	O95843	209 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	TBX18	O95935	607 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	CNP	P09543	421 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	CSF1	P09603	554 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	NHLRC4	P0CG21	123 aa	Predicted RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	THEGL	P0DJG4	465 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	SKIL	P12757	684 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	CYP4B1	P13584	511 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	EEF2	P13639	858 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ACP5	P13686	325 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ST6GAL1	P15907	406 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ALOX12	P18054	663 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ATP5D	P30049	168 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	CLK3	P49761	638 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	RPS6KA3	P51812	740 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	DRG2	P55039	364 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	HUNK	P57058	714 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	FKBP1B	P68106	108 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	B4GALNT1	Q00973	533 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	THOC5	Q13769	683 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	SEMA3A	Q14563	771 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	WTAP	Q15007	396 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	RASA2	Q15283	850 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	NFIL3	Q16649	462 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ANKDD1A	Q495B1	522 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	CAVIN4	Q5BKX8	364 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ARL13A	Q5H913	290 aa	Predicted RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	CBWD5	Q5RIA9	395 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	MAP3K21	Q5TCX8	1036 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	LIPM	Q5VYY2	423 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	APOBEC3H	Q6NTF7	200 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	RGMB	Q6NW40	437 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	KDELC1	Q6UW63	502 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	MOB2	Q70IA6	237 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	TMEM200A	Q86VY9	491 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	RHPN2	Q8IUC4	686 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.26	□□□□□ -1.73

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