RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TSPAN33Q86UF1 283 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 PDZD3Q86UT5 571 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 VSIG1Q86XK7 387 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 SFTPA2Q8IWL1 248 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 NDUFAF2Q8N183 169 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 SNIP1Q8TAD8 396 aaKnown RBP15.99■□□□□ 0.15
LMX1B-204ENST00000561065 MAML1Q92585 1016 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 DEPDC7Q96QD5 511 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 MCCC1Q96RQ3 725 aaPredicted RBP15.99■□□□□ 0.15
LMX1B-204ENST00000561065 NT5MQ9NPB1 228 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 SIRPGQ9P1W8 387 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 IMPACTQ9P2X3 320 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 RABGEF1Q9UJ41 708 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 PMS2P1A4D2B8 440 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 ZNF487B1APH4 448 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 SPOPO43791 374 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 PGLSO95336 258 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 MPOP05164 745 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 PDHA1P08559 390 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 HTR1BP28222 390 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 VIPR1P32241 457 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 TRIM23P36406 574 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 EIF2S3P41091 472 aaKnown RBP15.98■□□□□ 0.15
LMX1B-204ENST00000561065 BLKP51451 505 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 GBE1Q04446 702 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 ACOX1Q15067 660 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 IFI16Q16666 785 aaKnown RBP15.98■□□□□ 0.15
LMX1B-204ENST00000561065 ALG1LQ6GMV1 187 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 HSD11B1LQ7Z5J1 315 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 RHOT1Q8IXI2 618 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 CBARPQ8N350 705 aaPredicted RBP15.98■□□□□ 0.15
LMX1B-204ENST00000561065 FSTL5Q8N475 847 aaPredicted RBP15.98■□□□□ 0.15
LMX1B-204ENST00000561065 NUS1Q96E22 293 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 DTD2Q96FN9 168 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 RBM15Q96T37 977 aaKnown RBP eCLIP15.98■□□□□ 0.15
LMX1B-204ENST00000561065 EVA1BQ9NVM1 165 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 NCKIPSDQ9NZQ3 722 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 EPN1Q9Y6I3 576 aaPredicted RBP15.98■□□□□ 0.15
LMX1B-204ENST00000561065 DGKBQ9Y6T7 804 aa15.98■□□□□ 0.15
LMX1B-204ENST00000561065 FZD6O60353 706 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 LCA5LO95447 670 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 ALPIP09923 528 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 CTPS1P17812 591 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 ETV3P41162 512 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 HADHBP55084 474 aaKnown RBP15.97■□□□□ 0.15
LMX1B-204ENST00000561065 DSC2Q02487 901 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 SLC10A2Q12908 348 aaPredicted RBP15.97■□□□□ 0.15
LMX1B-204ENST00000561065 ELOCQ15369 112 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 ISXQ2M1V0 245 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 TBC1D25Q3MII6 688 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 FAM182AQ5T1J6 154 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 PNCKQ6P2M8 343 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 RFLNAQ6ZTI6 216 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 ARL10Q8N8L6 244 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 OR56A4Q8NGH8 313 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 PTCD2Q8WV60 388 aaKnown RBP15.97■□□□□ 0.15
LMX1B-204ENST00000561065 PIH1D2Q8WWB5 315 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 RAPGEF5Q92565 580 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 SEMA3CQ99985 751 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 CCDC3Q9BQI4 270 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 WDR26Q9H7D7 661 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 KCTD5Q9NXV2 234 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 AMACRQ9UHK6 382 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 PCDHA13Q9Y5I0 950 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 RAI2Q9Y5P3 530 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 ZFC3H1O60293 1989 aaKnown RBP15.97■□□□□ 0.15
LMX1B-204ENST00000561065 SCN8AQ9UQD0 1980 aa15.97■□□□□ 0.15
LMX1B-204ENST00000561065 A0A0A6YYK5 440 aaPredicted RBP15.96■□□□□ 0.15
LMX1B-204ENST00000561065 CACNB4O00305 520 aaPredicted RBP15.96■□□□□ 0.15
LMX1B-204ENST00000561065 USP12O75317 370 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 HLA-DQB2P05538 268 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 KDELR1P24390 212 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 CCNCP24863 283 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 GABREP78334 506 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 DENND2CQ68D51 928 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 HEATR4Q86WZ0 1026 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.96■□□□□ 0.15
LMX1B-204ENST00000561065 CCL4L1Q8NHW4 92 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 NAT6Q93015 286 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 TMEM168Q9H0V1 697 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 ABCG4Q9H172 646 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 DTLQ9NZJ0 730 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 PADI4Q9UM07 663 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 PHTF1Q9UMS5 762 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 PPIL1Q9Y3C6 166 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 ENTPD2Q9Y5L3 495 aa15.96■□□□□ 0.15
LMX1B-204ENST00000561065 PRSS38A1L453 326 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 LRRD1A4D1F6 860 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 NTN3O00634 580 aaPredicted RBP15.95■□□□□ 0.14
LMX1B-204ENST00000561065 SOD1P00441 154 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 FUCA1P04066 466 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 HOXC4P09017 264 aaPredicted RBP15.95■□□□□ 0.14
LMX1B-204ENST00000561065 MYCLP1P12525 358 aaPredicted RBP15.95■□□□□ 0.14
LMX1B-204ENST00000561065 CTSEP14091 401 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 CA4P22748 312 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 CDC25BP30305 580 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 CETN2P41208 172 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 ABCG1P45844 678 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 RPIAP49247 311 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 NAP1L1P55209 391 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms