RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ATP5OP48047 213 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 SRP54P61011 504 aaKnown RBP12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 COPS2P61201 443 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 ADCY2Q08462 1091 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 LRRC66Q68CR7 880 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 RAET1GQ6H3X3 334 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 CCDC70Q6NSX1 233 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 PNCKQ6P2M8 343 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 Q6ZVL8 140 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 HSD11B1LQ7Z5J1 315 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 GALNT15Q8N3T1 639 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 UBL4BQ8N7F7 174 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 CNTD1Q8N815 330 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 COQ10AQ96MF6 247 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 WDR92Q96MX6 357 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 SMIM14Q96QK8 99 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 MCCC1Q96RQ3 725 aaPredicted RBP12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 FERMT1Q9BQL6 677 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 EVA1BQ9NVM1 165 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 TRIM10Q9UDY6 481 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 CD84Q9UIB8 345 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 AMFRQ9UKV5 643 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 DNPEPQ9ULA0 475 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 WASF3Q9UPY6 502 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 PCDHA3Q9Y5H8 950 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 C1orf232A0A0U1RR37 186 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 GRID2IPA4D2P6 1211 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 CAPN8A6NHC0 703 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 C1QTNF9BB2RNN3 333 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 PSMD11O00231 422 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 PDE2AO00408 941 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 MTSS1O43312 755 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 FZD6O60353 706 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 TNFP01375 233 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 SLC4A1P02730 911 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 C1QTNF9P0C862 333 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 MYF5P13349 255 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 TSHRP16473 764 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 ZNF30P17039 623 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 ACADVLP49748 655 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 HK3P52790 923 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 RPL26P61254 145 aaKnown RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 SKOR1P84550 965 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 GALNT3Q14435 633 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 ELOCQ15369 112 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 PPP2R5EQ16537 467 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 TAZQ16635 292 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 ALG11Q2TAA5 492 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 PROX2Q3B8N5 592 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 TEX44Q53QW1 395 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 ESRP1Q6NXG1 681 aaKnown RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 ZCCHC8Q6NZY4 707 aaKnown RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 CRTC1Q6UUV9 634 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 UNQ6494/PRO21346Q6UXR6 183 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 BBS12Q6ZW61 710 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 OR56A4Q8NGH8 313 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 SPATA22Q8NHS9 363 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 CCHCR1Q8TD31 782 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 SCG3Q8WXD2 468 aaKnown RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 GLMNQ92990 594 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 FUBP1Q96AE4 644 aaKnown RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 DTD2Q96FN9 168 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 APOLD1Q96LR9 279 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 MLPHQ9BV36 600 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 LRRC61Q9BV99 259 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 PHPT1Q9NRX4 125 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 UBP1Q9NZI7 540 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 KLHL8Q9P2G9 620 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 PNMA8BQ9ULN7 279 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 PACSIN2Q9UNF0 486 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 RPL26L1Q9UNX3 145 aaKnown RBP12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 PPIL1Q9Y3C6 166 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 MSRB2Q9Y3D2 182 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 PCDHGA1Q9Y5H4 931 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 CSNK1G3Q9Y6M4 447 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 SPEGQ15772 3267 aa12.97□□□□□ -0.33
CTDSPL2-209ENST00000560620 A0A0U1RQJ8 604 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 CPED1A4D0V7 1026 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 FAM149AA5PLN7 773 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 TMEM202A6NGA9 273 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 F5H423 210 aaPredicted RBP12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 APOC4-APOC2K7ER74 178 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 NRDCO43847 1150 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 PMPCBO75439 489 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 GCATO75600 419 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 CLDN7O95471 211 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 FTCDO95954 541 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 PRLP01236 227 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 APOC2P02655 101 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 MMP2P08253 660 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 C1SP09871 688 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 CDK4P11802 303 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 GM2AP17900 193 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 PTPN3P26045 913 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 GPR1P46091 355 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 DUSP3P51452 185 aaPredicted RBP12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 KIAA1024LP59773 190 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 IHHQ14623 411 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 PRKD1Q15139 912 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms