RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 ANKS4BQ8N8V4 417 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 LEMD2Q8NC56 503 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 AGR3Q8TD06 166 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 CALML6Q8TD86 181 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 ANKRD49Q8WVL7 239 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 ISL2Q96A47 359 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 ASB16Q96NS5 453 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 C1QTNF1Q9BXJ1 281 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 NMRAL1Q9HBL8 299 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 NLE1Q9NVX2 485 aaPredicted RBP10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 TBC1D14Q9P2M4 693 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 COPG2Q9UBF2 871 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 DPP7Q9UHL4 492 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 ATG2BQ96BY7 2078 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 C1orf232A0A0U1RR37 186 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 STX7O15400 261 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 IGSF6O95976 241 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 MPOP05164 745 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 SBK3P0C264 359 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 FMO4P31512 558 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 HNF1BP35680 557 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 PEX6Q13608 980 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 SLC12A1Q13621 1099 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 GRM2Q14416 872 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 EML3Q32P44 896 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 RNF43Q68DV7 783 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 TANGO2Q6ICL3 276 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 FAM151BQ6UXP7 276 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 KYAT3Q6YP21 454 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 RGS9BPQ6ZS82 235 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 RTL10Q7L3V2 364 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 NLRP9Q7RTR0 991 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 CLEC14AQ86T13 490 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 FSTL5Q8N475 847 aaPredicted RBP10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 GDF15Q99988 308 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 SHCBP1LQ9BZQ2 653 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 SFXN1Q9H9B4 322 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 GTSE1Q9NYZ3 720 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 SIRPGQ9P1W8 387 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 SLC25A13Q9UJS0 675 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 FAM50BQ9Y247 325 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 ACOT9Q9Y305 439 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 NUMBLQ9Y6R0 609 aa10.88□□□□□ -0.67
SNRPA1-211ENST00000560433 HEPACAM2A8MVW5 462 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 FGF3P11487 239 aaPredicted RBP10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 ADH5P11766 374 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 CES1P23141 567 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 PLK1P53350 603 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 ACVR1Q04771 509 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 HYAL1Q12794 435 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 MYLK3Q32MK0 819 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 TAF1BQ53T94 588 aaPredicted RBP10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 ELMSAN1Q6PJG2 1045 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 NAPRTQ6XQN6 538 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 RFLNAQ6ZTI6 216 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 HEXDCQ8WVB3 486 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 OSCP1Q8WVF1 389 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 GPAMQ9HCL2 828 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 GALPQ9UBC7 116 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 TSR3Q9UJK0 312 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 HS3ST2Q9Y278 367 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 STARD13Q9Y3M8 1113 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 ZNF711Q9Y462 761 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 NEMP2A6NFY4 417 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 NPIPB15A6NHN6 443 aaPredicted RBP10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 IQCF5A8MTL0 148 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 G3V2L1 256 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 CCDC166P0CW27 439 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 CPA3P15088 417 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 POLR2EP19388 210 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 DGKGP49619 791 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 CSRP3P50461 194 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 AP1S1P61966 158 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 SNRPD1P62314 119 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 KDSRQ06136 332 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 SYCE2Q6PIF2 218 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 RPS27LQ71UM5 84 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 TAS2R42Q7RTR8 314 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 TMEM151AQ8N4L1 468 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 TTC30BQ8N4P2 665 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 FITM2Q8N6M3 262 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 BPIFB1Q8TDL5 484 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 NXPE3Q969Y0 559 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 RPP25Q9BUL9 199 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 ATP13A3Q9H7F0 1226 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 KLHL14Q9P2G3 628 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 XPR1Q9UBH6 696 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 VWA7Q9Y334 891 aa10.87□□□□□ -0.67
SNRPA1-211ENST00000560433 ANKRD12Q6UB98 2062 aa10.86□□□□□ -0.67
SNRPA1-211ENST00000560433 A0A0J9YYE9 177 aa10.86□□□□□ -0.67
SNRPA1-211ENST00000560433 WASH3PC4AMC7 463 aa10.86□□□□□ -0.67
SNRPA1-211ENST00000560433 PRRT4C9JH25 899 aa10.86□□□□□ -0.67
SNRPA1-211ENST00000560433 TULP3O75386 442 aa10.86□□□□□ -0.67
SNRPA1-211ENST00000560433 TRBC1P01850 177 aa10.86□□□□□ -0.67
SNRPA1-211ENST00000560433 HLA-EP13747 358 aa10.86□□□□□ -0.67
SNRPA1-211ENST00000560433 UGT1A6P19224 532 aa10.86□□□□□ -0.67
SNRPA1-211ENST00000560433 UGT1A1P22309 533 aa10.86□□□□□ -0.67
SNRPA1-211ENST00000560433 UGT1A4P22310 534 aa10.86□□□□□ -0.67
SNRPA1-211ENST00000560433 UGT1A3P35503 534 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms