RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 RETREG1Q9H6L5 497 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 SUDS3Q9H7L9 328 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 CARS2Q9HA77 564 aaKnown RBP12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 CUEDC1Q9NWM3 386 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 PDP2Q9P2J9 529 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 TMEM184BQ9Y519 407 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 PDZD2O15018 2839 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 AKAP9Q99996 3911 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 MTORP42345 2549 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 FAM170AA1A519 330 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 CFAP69A5D8W1 941 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 TTLL8A6PVC2 850 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 BUB1BO60566 1050 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 KRT38O76015 456 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 STK17BO94768 372 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 LRIG2O94898 1065 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 SMC2O95347 1197 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 PDGFAP04085 211 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 FURINP09958 794 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 SLC9A1P19634 815 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 POU3F2P20265 443 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 ADRA1BP35368 520 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 CLCN1P35523 988 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 STAT5AP42229 794 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 ILF3Q12906 894 aaKnown RBP eCLIP12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 BIRC2Q13490 618 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 STIM1Q13586 685 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 CYTH1Q15438 398 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 C2CD6Q53TS8 623 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 ISM2Q6H9L7 571 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 KLHL10Q6JEL2 608 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 KDELC2Q7Z4H8 507 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 TICAM1Q8IUC6 712 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 CPT1CQ8TCG5 803 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 PTCD2Q8WV60 388 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 SMARCE1Q969G3 411 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 C18orf8Q96DM3 657 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 NCAPGQ9BPX3 1015 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 WDR26Q9H7D7 661 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 APMAPQ9HDC9 416 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 TMEM59LQ9UK28 342 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 AJAP1Q9UKB5 411 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 MAN1B1Q9UKM7 699 aa12.82□□□□□ -0.36
RABGGTA-213ENST00000560127 SEC16AO15027 2179 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 GOLGA6L4A6NEF3 574 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 TEX33O43247 280 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 DLGAP3O95886 979 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 CEACAM5P06731 702 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 PNMA6AP0CW24 399 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 CDH5P33151 784 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 COPB1P53618 953 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 UBE2HP62256 183 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 ATP11AP98196 1134 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 PNCKQ6P2M8 343 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 BRAT1Q6PJG6 821 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 SLC30A9Q6PML9 568 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 CEACAM20Q6UY09 585 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 LIPIQ6XZB0 460 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 ZNF354CQ86Y25 554 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 DNAAF5Q86Y56 855 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 CAMK1DQ8IU85 385 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 ELOA2Q8IYF1 753 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 TMEM35BQ8NCS4 154 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 NELFBQ8WX92 580 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 TBC1D31Q96DN5 1066 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 ZPBPQ9BS86 351 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 TRIT1Q9H3H1 467 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 FBXO8Q9NRD0 319 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 LMBRD1Q9NUN5 540 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 TRNAU1APQ9NX07 287 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 APEX2Q9UBZ4 518 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 TLK1Q9UKI8 766 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 SVILO95425 2214 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 HIVEP1P15822 2718 aa12.81□□□□□ -0.36
RABGGTA-213ENST00000560127 TACC2O95359 2948 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 CCDC168Q8NDH2 2452 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 A8MU76 341 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 GOLGA8SH3BPF8 625 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 PDE2AO00408 941 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 CLDN1O95832 211 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 GNA14O95837 355 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 DDAH2O95865 285 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 ELFN1P0C7U0 828 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 MYCLP1P12525 358 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 TNFRSF8P28908 595 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 GNPDA1P46926 289 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 GPLD1P80108 840 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 CTBSQ01459 385 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 RAPGEF1Q13905 1077 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 GRM3Q14832 879 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 SNAP47Q5SQN1 464 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 AFMIDQ63HM1 303 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 MAMDC2Q7Z304 686 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 ARHGAP22Q7Z5H3 698 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 ZNF761Q86XN6 746 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 EMC1Q8N766 993 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 ZNF641Q96N77 438 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 SUFUQ9UMX1 484 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 RPS6KL1Q9Y6S9 549 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms