RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 KRT34O76011 436 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 STC2O76061 302 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 RHOCP08134 193 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 FGF4P08620 206 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 CD1DP15813 335 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF37AP17032 561 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 HMGA1P17096 107 aaKnown RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ABL2P42684 1182 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 CCR10P46092 362 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ACADVLP49748 655 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 GATMP50440 423 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 NUDT2P50583 147 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 CLCN2P51788 898 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 CDKN2DP55273 166 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ATP6V0D1P61421 351 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 DSG1Q02413 1049 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 CDC16Q13042 620 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 STX5Q13190 355 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF177Q13360 481 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 PDCD2Q16342 344 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 PIGGQ5H8A4 983 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF678Q5SXM1 525 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 NXNQ6DKJ4 435 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 IL31Q6EBC2 164 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 PRSS55Q6UWB4 352 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 HACD2Q6Y1H2 254 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 CUZD1Q86UP6 607 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 KBTBD6Q86V97 674 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 HERC6Q8IVU3 1022 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 GPR65Q8IYL9 337 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 DSELQ8IZU8 1212 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 NKAPQ8N5F7 415 aaKnown RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 CATSPER1Q8NEC5 780 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 OR7D4Q8NG98 312 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 AGR3Q8TD06 166 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 BLOC1S5Q8TDH9 187 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 BCL7CQ8WUZ0 217 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ANKRD49Q8WVL7 239 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 TOP1MTQ969P6 601 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 PPP2R3CQ969Q6 453 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 MIEF2Q96C03 454 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 RCN3Q96D15 328 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 MYEOVQ96EZ4 313 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 CDKN2AIPNLQ96HQ2 116 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 B3GALT6Q96L58 329 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF512Q96ME7 567 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 CYP2S1Q96SQ9 504 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 TTC1Q99614 292 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ECSITQ9BQ95 431 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 HERC2P3Q9BVR0 1158 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 KLF16Q9BXK1 252 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 TDRD1Q9BXT4 1180 aaKnown RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 OSBPL1AQ9BXW6 950 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 DERL2Q9GZP9 239 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 NACA2Q9H009 215 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 VCXQ9H320 206 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 CYP4F11Q9HBI6 524 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 SCUBE2Q9NQ36 999 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 STOML2Q9UJZ1 356 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 PPM1HQ9ULR3 514 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 PSMD13Q9UNM6 376 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 TRAF6Q9Y4K3 522 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 KCTD3Q9Y597 815 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ZFP37Q9Y6Q3 630 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 LCHNA4D1U4 455 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 MAGEA13PA6NCF6 341 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 NEMP2A6NFY4 417 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 C2orf81A6NN90 581 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 TRIM38O00635 465 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 AIM2O14862 343 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 UBDO15205 165 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 COCHO43405 550 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 PDE5AO76074 875 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ABLIM3O94929 683 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 GJB5O95377 273 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 JUNP05412 331 aaKnown RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 PYGLP06737 847 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 LPOP22079 712 aaPredicted RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 KCNA5P22460 613 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ME2P23368 584 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 CDC25CP30307 473 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 OR1D2P34982 312 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 MRPL19P49406 292 aaKnown RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ALDH7A1P49419 539 aaKnown RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 CLCN4P51793 760 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 PGGT1BP53609 377 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 HERVK_113P63132 956 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 TIAL1Q01085 375 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 PDAP1Q13442 181 aaKnown RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ART3Q13508 389 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 PTK2BQ14289 1009 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 VEPH1Q14D04 833 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ZNF423Q2M1K9 1284 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 UNC50Q53HI1 259 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 INO80DQ53TQ3 878 aaPredicted RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 AARS2Q5JTZ9 985 aaKnown RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ADGRF1Q5T601 910 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 GPR158Q5T848 1215 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 TRIM68Q6AZZ1 485 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ZNF549Q6P9A3 640 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms