RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZFP1Q6P2D0 407 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 RSPO2Q6UXX9 243 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SLC22A9Q8IVM8 553 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 AFAP1L2Q8N4X5 818 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 TMEM102Q8N9M5 508 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 FAM110BQ8TC76 370 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 FAM45AQ8TCE6 357 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 TADA1Q96BN2 335 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CCDC126Q96EE4 140 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 LRCH3Q96II8 777 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 FAR2Q96K12 515 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 BTN2A3PQ96KV6 586 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SPATA16Q9BXB7 569 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 FNIP2Q9P278 1114 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 APPL1Q9UKG1 709 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 MRASO14807 208 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 CSPG5O95196 566 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 PIM1P11309 404 aaPredicted RBP10.05□□□□□ -0.8
LRRC28-216ENST00000559819 FDXRP22570 491 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 GSTT1P30711 240 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 INHBCP55103 352 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 SH3BP2P78314 561 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 ZNF235Q14590 738 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 NFE2Q16621 373 aaPredicted RBP10.05□□□□□ -0.8
LRRC28-216ENST00000559819 FAM171A1Q5VUB5 890 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 CWF19L1Q69YN2 538 aaKnown RBP10.05□□□□□ -0.8
LRRC28-216ENST00000559819 GALNT15Q8N3T1 639 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 GIPC2Q8TF65 315 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 CENPKQ9BS16 269 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 TRIM4Q9C037 500 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 IL1RL2Q9HB29 575 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 IKZF3Q9UKT9 509 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 TBC1D30Q9Y2I9 924 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 A0A1B0GTL3 188 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 DRGXA6NNA5 263 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 TRIM24O15164 1050 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 INPPL1O15357 1258 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 VNN2O95498 520 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 GLP2RO95838 553 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 SNRPB2P08579 225 aaKnown RBP10.05□□□□□ -0.8
LRRC28-216ENST00000559819 CKBP12277 381 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 PBX3P40426 434 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 STX5Q13190 355 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 PFKFB4Q16877 469 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 MGAT5BQ3V5L5 792 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 LARP4Q71RC2 724 aaKnown RBP eCLIP10.05□□□□□ -0.8
LRRC28-216ENST00000559819 FUNDC1Q8IVP5 155 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 MARVELD2Q8N4S9 558 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 OR7D4Q8NG98 312 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 LRTOMTQ8WZ04 291 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 LPGAT1Q92604 370 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 ASB9Q96DX5 294 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 C19orf60Q96EN9 201 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 FUBP3Q96I24 572 aaKnown RBP eCLIP10.05□□□□□ -0.8
LRRC28-216ENST00000559819 EXOC2Q96KP1 924 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 GPR62Q9BZJ7 368 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 POLR1EQ9GZS1 481 aaKnown RBP10.05□□□□□ -0.8
LRRC28-216ENST00000559819 UNC93B1Q9H1C4 597 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 AKTIPQ9H8T0 292 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 UTP6Q9NYH9 597 aaKnown RBP10.05□□□□□ -0.8
LRRC28-216ENST00000559819 SPO11Q9Y5K1 396 aa10.05□□□□□ -0.8
LRRC28-216ENST00000559819 DENRO43583 198 aaKnown RBP10.04□□□□□ -0.8
LRRC28-216ENST00000559819 PRKAR2AP13861 404 aaKnown RBP10.04□□□□□ -0.8
LRRC28-216ENST00000559819 TACR2P21452 398 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 PAX3P23760 479 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 RGRP47804 291 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 FCGRTP55899 365 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 TRIM25Q14258 630 aaKnown RBP10.04□□□□□ -0.8
LRRC28-216ENST00000559819 GRB7Q14451 532 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 NRF1Q16656 503 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 UGT3A2Q3SY77 523 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 FAM26DQ5JW98 314 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 TRAF7Q6Q0C0 670 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 RETREG3Q86VR2 466 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 LGI2Q8N0V4 545 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 ARHGAP18Q8N392 663 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 GABPB2Q8TAK5 448 aaPredicted RBP10.04□□□□□ -0.8
LRRC28-216ENST00000559819 TRPC4APQ8TEL6 797 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 DLG3Q92796 817 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 FATE1Q969F0 183 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 SLCO4A1Q96BD0 722 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 L3HYPDHQ96EM0 354 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 FAM193BQ96PV7 902 aaPredicted RBP10.04□□□□□ -0.8
LRRC28-216ENST00000559819 MID1IP1Q9NPA3 183 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 NMRK2Q9NPI5 230 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 BCAP29Q9UHQ4 241 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 BTRCQ9Y297 605 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 PLXNA3P51805 1871 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 DOCK4Q8N1I0 1966 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 A0A1B0GTW7 788 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 UBA6A0AVT1 1052 aaPredicted RBP10.04□□□□□ -0.8
LRRC28-216ENST00000559819 NT5C1B-RDH14C9J2C7 533 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 NR5A2O00482 541 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 PIP5K1BO14986 540 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 NRP2O60462 931 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 PRAMEF11O60813 436 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 RPP40O75818 363 aaKnown RBP10.04□□□□□ -0.8
LRRC28-216ENST00000559819 SRP72O76094 671 aaKnown RBP10.04□□□□□ -0.8
LRRC28-216ENST00000559819 CDK14O94921 469 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 SNUPNO95149 360 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms