RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 TEKT5Q96M29 485 aa16.91■□□□□ 0.3
PSEN1-224ENST00000559361 SPATA13Q96N96 652 aa16.91■□□□□ 0.3
PSEN1-224ENST00000559361 TUBGCP5Q96RT8 1024 aa16.91■□□□□ 0.3
PSEN1-224ENST00000559361 SEMA4CQ9C0C4 833 aa16.91■□□□□ 0.3
PSEN1-224ENST00000559361 USP29Q9HBJ7 922 aa16.91■□□□□ 0.3
PSEN1-224ENST00000559361 SEPT10Q9P0V9 454 aa16.91■□□□□ 0.3
PSEN1-224ENST00000559361 K7ERQ8 282 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 TRIM38O00635 465 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 GCATO75600 419 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 GAS8O95995 478 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 ADH1BP00325 375 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 JCHAINP01591 159 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 DRD3P35462 400 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 COILP38432 576 aaPredicted RBP16.9■□□□□ 0.3
PSEN1-224ENST00000559361 UCNP55089 124 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 PCBP4P57723 403 aaKnown RBP16.9■□□□□ 0.3
PSEN1-224ENST00000559361 PPP2CBP62714 309 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 PPP2CAP67775 309 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 WASHC5Q12768 1159 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 CDCP2Q5VXM1 449 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 CCDC137Q6PK04 289 aaKnown RBP16.9■□□□□ 0.3
PSEN1-224ENST00000559361 Q6ZVU0 165 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 SYDE1Q6ZW31 735 aaPredicted RBP16.9■□□□□ 0.3
PSEN1-224ENST00000559361 SLC25A45Q8N413 288 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 SPATA4Q8NEY3 305 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 OR2A12Q8NGT7 310 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 CCHCR1Q8TD31 782 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 OR8D1Q8WZ84 308 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 TTC9Q92623 222 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 SLCO2A1Q92959 643 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 NUDCD1Q96RS6 583 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 FAM118BQ9BPY3 351 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 TMEM121Q9BTD3 319 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 OSBPL1AQ9BXW6 950 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 KDM4CQ9H3R0 1056 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 KLHL8Q9P2G9 620 aaPredicted RBP16.9■□□□□ 0.3
PSEN1-224ENST00000559361 LHX3Q9UBR4 397 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 ATP8A1Q9Y2Q0 1164 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 PCDHB1Q9Y5F3 818 aa16.9■□□□□ 0.3
PSEN1-224ENST00000559361 AHCTF1Q8WYP5 2266 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.89■□□□□ 0.29
PSEN1-224ENST00000559361 B8ZZF3 427 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 PDE2AO00408 941 aaPredicted RBP16.89■□□□□ 0.29
PSEN1-224ENST00000559361 SIGLEC6O43699 453 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 MAGEC1O60732 1142 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 ZNF821O75541 412 aaPredicted RBP16.89■□□□□ 0.29
PSEN1-224ENST00000559361 POP4O95707 220 aaKnown RBP16.89■□□□□ 0.29
PSEN1-224ENST00000559361 PRNPP04156 253 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 CR2P20023 1033 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 CA4P22748 312 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 NUDT1P36639 197 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 NUMBP49757 651 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 TMPRSS3P57727 454 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 ZBTB17Q13105 803 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 SNX1Q13596 522 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 DHX34Q14147 1143 aaKnown RBP16.89■□□□□ 0.29
PSEN1-224ENST00000559361 KDM7AQ6ZMT4 941 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 LEKR1Q6ZMV7 388 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 GSTA5Q7RTV2 222 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 CEP112Q8N8E3 955 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 FAM71DQ8N9W8 422 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 TSEN2Q8NCE0 465 aaKnown RBP16.89■□□□□ 0.29
PSEN1-224ENST00000559361 HEPHQ9BQS7 1158 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 CPEB1Q9BZB8 566 aaKnown RBP16.89■□□□□ 0.29
PSEN1-224ENST00000559361 CPNE5Q9HCH3 593 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 NT5MQ9NPB1 228 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 SMARCAL1Q9NZC9 954 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 HECAQ9UBI9 543 aaPredicted RBP16.89■□□□□ 0.29
PSEN1-224ENST00000559361 PCYOX1Q9UHG3 505 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 CHD5Q8TDI0 1954 aa16.89■□□□□ 0.29
PSEN1-224ENST00000559361 TLN1Q9Y490 2541 aaKnown RBP16.89■□□□□ 0.29
PSEN1-224ENST00000559361 TBC1D3DA0A087WVF3 549 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 TBC1D3IA0A087WXS9 549 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 TBC1D3EA0A087X179 549 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 TBC1D3KA0A087X1G2 549 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 A0A1W2PQ67 120 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 GOLGA6CA6NDK9 693 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 GOLGA6BA6NDN3 693 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 TBC1D3FA6NER0 549 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-224ENST00000559361 TBC1D3LB9A6J9 549 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 ECEL1O95672 775 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 HLA-DQB2P05538 268 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 TBC1D3HP0C7X1 549 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 GOLGA6DP0CG33 693 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 PSMD8P48556 350 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 CCNHP51946 323 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-224ENST00000559361 ERVPABLB-1P60509 514 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 MYLK3Q32MK0 819 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 FAM46CQ5VWP2 391 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 TBC1D3GQ6DHY5 549 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 TBC1D3CQ6IPX1 549 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 ARHGEF18Q6ZSZ5 1173 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 PID1Q7Z2X4 250 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 PRPF39Q86UA1 669 aaKnown RBP16.88■□□□□ 0.29
PSEN1-224ENST00000559361 TBC1D3Q8IZP1 549 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-224ENST00000559361 LSMEM2Q8N112 164 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 ZNF567Q8N184 647 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 STK40Q8N2I9 435 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 CNTD1Q8N815 330 aa16.88■□□□□ 0.29
PSEN1-224ENST00000559361 TMIEQ8NEW7 156 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms