RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 TBATAQ96M53 351 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 OLFM3Q96PB7 478 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PPP1R2P1Q96PQ5 205 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ALS2CR12Q96Q35 445 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 MCCC1Q96RQ3 725 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 APOOQ9BUR5 198 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 MLPHQ9BV36 600 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 FSD1LQ9BXM9 530 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 TDRD1Q9BXT4 1180 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 CDH19Q9H159 772 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 GOLPH3Q9H4A6 298 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ZFYVE1Q9HBF4 777 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 MBNL1Q9NR56 388 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 PHPT1Q9NRX4 125 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 GPR27Q9NS67 375 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 GOLGA6AQ9NYA3 693 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 KLHL8Q9P2G9 620 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 SAE1Q9UBE0 346 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 B4GALT6Q9UBX8 382 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 KLQ9UEF7 1012 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 MOSPD1Q9UJG1 213 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 TRHDEQ9UKU6 1024 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 TFR2Q9UP52 801 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 CHKBQ9Y259 395 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 BTBD3Q9Y2F9 522 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 COQ6Q9Y2Z9 468 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PPIL1Q9Y3C6 166 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 NEUROG3Q9Y4Z2 214 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 OR1A2Q9Y585 309 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PCDHA3Q9Y5H8 950 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 CSNK1G3Q9Y6M4 447 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 DUSP10Q9Y6W6 482 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ASCC3Q8N3C0 2202 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 TPRP12270 2363 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 PCNX2A6NKB5 2137 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 A0A0J9YYE9 177 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 C1orf232A0A0U1RR37 186 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 RGSL1A5PLK6 1076 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 TMEM8BA6NDV4 472 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 RCCD1A6NED2 376 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 GOLGA6L3A6NEY3 463 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 CAPN8A6NHC0 703 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 LMO7DNF2Z398 122 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 H7C0C1 242 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 K7ESM1 405 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 TNFRSF10CO14798 259 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 PJA2O43164 708 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 SIGLEC6O43699 453 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 FZD6O60353 706 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 ANXA9O76027 345 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 EPOP01588 193 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 TRBC1P01850 177 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 GP1BAP07359 652 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 HOXC4P09017 264 aaPredicted RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 ATXN1LP0C7T5 689 aaKnown RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 MYCLP1P12525 358 aaPredicted RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 CKMT1AP12532 417 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 JUPP14923 745 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 CTPS1P17812 591 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 LHCGRP22888 699 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 ACP1P24666 158 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 PTPN3P26045 913 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 PTPN7P35236 360 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 ETV3P41162 512 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 GPR1P46091 355 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 ATP5OP48047 213 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 KIAA1024LP59773 190 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 SRP54P61011 504 aaKnown RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 SKOR1P84550 965 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 CDK3Q00526 305 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 SEMG2Q02383 582 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 PTSQ03393 145 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 CDK18Q07002 472 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 DPTQ07507 201 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 ILF3Q12906 894 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNX1-205ENST00000559339 RALGDSQ12967 914 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 ZBTB17Q13105 803 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 DNAJC3Q13217 504 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 BIRC2Q13490 618 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 PRPSAP1Q14558 356 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 PRKD1Q15139 912 aaPredicted RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 LLGL1Q15334 1064 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 SHBQ15464 509 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 SMAD1Q15797 465 aaKnown RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 SLC14A2Q15849 920 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 CNGA3Q16281 694 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 PCSK7Q16549 785 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 TAZQ16635 292 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 ZDHHC20Q5W0Z9 365 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 ITPRIPL1Q6GPH6 555 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 CRTC1Q6UUV9 634 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 NPNTQ6UXI9 565 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 Q6ZVL8 140 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 BBS12Q6ZW61 710 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 RD3Q7Z3Z2 195 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 KDELC2Q7Z4H8 507 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 RAB44Q7Z6P3 723 aaPredicted RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 SLCO6A1Q86UG4 719 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 NLRP8Q86W28 1048 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 HEATR4Q86WZ0 1026 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms