RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 MIS18BP1Q6P0N0 1132 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 DCLRE1AQ6PJP8 1040 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 QSOX2Q6ZRP7 698 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 FAM57BQ71RH2 274 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ADCK2Q7Z695 626 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 TRIM74Q86UV6 250 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 TRIM73Q86UV7 250 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 AACSQ86V21 672 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 IQCHQ86VS3 1027 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 CAMK1DQ8IU85 385 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 EPHX4Q8IUS5 362 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 FAM217AQ8IXS0 508 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 SLC35F3Q8IY50 421 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 CCDC170Q8IYT3 715 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 RNF168Q8IYW5 571 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 NUP93Q8N1F7 819 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 BEST2Q8NFU1 509 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 OR4N2Q8NGD1 307 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 MGARPQ8TDB4 240 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 DEPDC1BQ8WUY9 529 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 LPGAT1Q92604 370 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 MAP4K1Q92918 833 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF622Q969S3 477 aaKnown RBP eCLIP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 REPS1Q96D71 796 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 HDAC11Q96DB2 347 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF503Q96F45 646 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 P2RY11Q96G91 374 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF333Q96JL9 665 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 CEP295NLQ96MC4 621 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 SEPT5Q99719 369 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 FERMT1Q9BQL6 677 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 PCGF1Q9BSM1 259 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 NAA11Q9BSU3 229 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 HGH1Q9BTY7 390 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 GATA5Q9BWX5 397 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 KLK15Q9H2R5 256 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 XAB2Q9HCS7 855 aaKnown RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 PNRC2Q9NPJ4 139 aaKnown RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 DECR2Q9NUI1 292 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 SELENONQ9NZV5 590 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 MTRRQ9UBK8 725 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ANAPC2Q9UJX6 822 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 RCOR1Q9UKL0 485 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 PADI1Q9ULC6 663 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 PLAGL1Q9UM63 463 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ZFP37Q9Y6Q3 630 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 SLC4A4Q9Y6R1 1079 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 KAT6AQ92794 2004 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 RPGRIP1LQ68CZ1 1315 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF644Q9H582 1327 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 TRBV5-7A0A0A0MS05 114 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TRAV34A0A0B4J273 112 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 A0A0U1RQF3 1178 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TMEM202A6NGA9 273 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TMEM191CA6NGB0 347 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 KDM4EB2RXH2 506 aaPredicted RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 NPIPB8E9PQR5 432 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 F8W810 466 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 H0Y626 953 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 H0YIN7 160 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 HSPB6O14558 160 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 VCYO14598 125 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ATP2A1O14983 1001 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 PRPF4O43172 522 aaKnown RBP eCLIP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ZC3H11AO75152 810 aaKnown RBP eCLIP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TRUB2O95900 331 aaKnown RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 PENKP01210 267 aaPredicted RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 MMP2P08253 660 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ENO3P13929 434 aaPredicted RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ATP6V1B1P15313 513 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TRIM21P19474 475 aaKnown RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 DNASE1P24855 282 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TLX1P31314 330 aaPredicted RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TNFSF8P32971 234 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CCR10P46092 362 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 AMPHP49418 695 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 SUOXP51687 545 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ARSEP51690 589 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CACNA2D1P54289 1103 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CDH12P55289 794 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TAS2R40P59535 323 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TUBA4AP68366 448 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 MRPS34P82930 218 aaKnown RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 HSF1Q00613 529 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ECT2LQ008S8 904 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 SCN1BQ07699 218 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 KLF10Q13118 480 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CDSNQ15517 529 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 DLG2Q15700 870 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 PNLIPRP3Q17RR3 467 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 SOWAHAQ2M3V2 549 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CCDC92Q53HC0 331 aaPredicted RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 MIIPQ5JXC2 388 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 FNDC7Q5VTL7 733 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TMEM198Q66K66 360 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 HIST2H2BCQ6DN03 193 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 HIST2H2BDQ6DRA6 164 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 SIGIRRQ6IA17 410 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 HEPHL1Q6MZM0 1159 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CFAP77Q6ZQR2 320 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms