RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SLCO2A1Q92959 643 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 MAGEE1Q9HCI5 957 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 AASDHPPTQ9NRN7 309 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 PIH1D1Q9NWS0 290 aaKnown RBP17.46■□□□□ 0.39
TPM1-214ENST00000558544 SUSD2Q9UGT4 822 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 MRFAP1Q9Y605 127 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 BPTFQ12830 3046 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 PATE3B3GLJ2 98 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 PRAMEF26H0Y7S4 382 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 PSMD11O00231 422 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 BCAT2O15382 392 aaPredicted RBP17.45■□□□□ 0.38
TPM1-214ENST00000558544 GNSP15586 552 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 ETV3P41162 512 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 STC1P52823 247 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 DR1Q01658 176 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 PTSQ03393 145 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 DENND5AQ6IQ26 1287 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 LAYNQ6UX15 382 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 ZNF572Q7Z3I7 529 aaPredicted RBP17.45■□□□□ 0.38
TPM1-214ENST00000558544 TP53I13Q8NBR0 393 aaPredicted RBP17.45■□□□□ 0.38
TPM1-214ENST00000558544 TMEM145Q8NBT3 493 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 ASB12Q8WXK4 309 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 COQ10AQ96MF6 247 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 KLF6Q99612 283 aaPredicted RBP17.45■□□□□ 0.38
TPM1-214ENST00000558544 HINFPQ9BQA5 517 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 C1QTNF7Q9BXJ2 289 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 GPR63Q9BZJ6 419 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 ZFYVE1Q9HBF4 777 aa17.45■□□□□ 0.38
TPM1-214ENST00000558544 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.44■□□□□ 0.38
TPM1-214ENST00000558544 A0A1B0GTW7 788 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 H0Y8X5 98 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 AURKAO14965 403 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 TTI1O43156 1089 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 SUN1O94901 812 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 HOXD12P35452 270 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 IGFALSP35858 605 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 CLDN2P57739 230 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 RACK1P63244 317 aaKnown RBP17.44■□□□□ 0.38
TPM1-214ENST00000558544 SPEM2Q0P670 501 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 PTK6Q13882 451 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 AGERQ15109 404 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 IRF4Q15306 451 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 DUOXA1Q1HG43 343 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 PPP1R21Q6ZMI0 780 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 KDM7AQ6ZMT4 941 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 GCNT7Q6ZNI0 430 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 RFLNAQ6ZTI6 216 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 GLT6D1Q7Z4J2 308 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 LINC00523Q86TU6 105 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 JAMLQ86YT9 394 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 CBARPQ8N350 705 aaPredicted RBP17.44■□□□□ 0.38
TPM1-214ENST00000558544 DENND6BQ8NEG7 585 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 OR52K1Q8NGK4 314 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 CCHCR1Q8TD31 782 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 NUS1Q96E22 293 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 DTD2Q96FN9 168 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 LENG8Q96PV6 779 aaPredicted RBP17.44■□□□□ 0.38
TPM1-214ENST00000558544 SRPK1Q96SB4 655 aaKnown RBP17.44■□□□□ 0.38
TPM1-214ENST00000558544 TRIM51Q9BSJ1 452 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 EIF2B3Q9NR50 452 aaKnown RBP17.44■□□□□ 0.38
TPM1-214ENST00000558544 MBNL1Q9NR56 388 aaKnown RBP17.44■□□□□ 0.38
TPM1-214ENST00000558544 ASIC3Q9UHC3 531 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 CD84Q9UIB8 345 aa17.44■□□□□ 0.38
TPM1-214ENST00000558544 ZFHX2Q9C0A1 2572 aaPredicted RBP17.44■□□□□ 0.38
TPM1-214ENST00000558544 TCRBV7S3A2A0A539 114 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 CFIP05156 583 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 PCCBP05166 539 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 CD38P28907 300 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 GRIA1P42261 906 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 AFF3P51826 1226 aaKnown RBP17.43■□□□□ 0.38
TPM1-214ENST00000558544 MRPS25P82663 173 aaKnown RBP17.43■□□□□ 0.38
TPM1-214ENST00000558544 DHX34Q14147 1143 aaKnown RBP17.43■□□□□ 0.38
TPM1-214ENST00000558544 KCNJ11Q14654 390 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 STAT4Q14765 748 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 LRRC14Q15048 493 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 WSCD2Q2TBF2 565 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 TRIM61Q5EBN2 209 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 PLA2G2CQ5R387 149 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 TCEAL6Q6IPX3 200 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 Q6ZVL8 140 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 TECPR1Q7Z6L1 1165 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 RABEPKQ7Z6M1 372 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 DCLK2Q8N568 766 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 RUBCNQ92622 972 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 TCEAL3Q969E4 200 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 CENPTQ96BT3 561 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 EID2BQ96D98 161 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 ARNT2Q9HBZ2 717 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 HACD3Q9P035 362 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 DNAH14Q0VDD8 3507 aa17.43■□□□□ 0.38
TPM1-214ENST00000558544 LRP4O75096 1905 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 PLXNB3Q9ULL4 1909 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 POM121BA6NF01 834 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 PRR5-ARHGAP8B1AHC4 643 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 FPGTO14772 594 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 WNT1P04628 370 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 TPH1P17752 444 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 TPSB2P20231 275 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 CSNK1EP49674 416 aaKnown RBP17.42■□□□□ 0.38
TPM1-214ENST00000558544 CDH17Q12864 832 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms