RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 APOOQ9BUR5 198 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 MLPHQ9BV36 600 aaPredicted RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 HEMGNQ9BXL5 484 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 SLC13A1Q9BZW2 595 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 GRPEL1Q9HAV7 217 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 PCDH9Q9HC56 1237 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 MBNL1Q9NR56 388 aaKnown RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 DNAJC28Q9NX36 388 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 NCKIPSDQ9NZQ3 722 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 SEPT10Q9P0V9 454 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 SAE1Q9UBE0 346 aaPredicted RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 SPASTQ9UBP0 616 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 B4GALT6Q9UBX8 382 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 FTSJ1Q9UET6 329 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 GUCA1BQ9UMX6 200 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 PCDHGA1Q9Y5H4 931 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 SRRM3A6NNA2 597 aaPredicted RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 A8MX80 341 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 H7C0C1 242 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 CACNB4O00305 520 aaPredicted RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 TPP1O14773 563 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 TNFRSF10CO14798 259 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 SCAMP1O15126 338 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 PIAS2O75928 621 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 STK10O94804 968 aaKnown RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 PRLP01236 227 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 PDHA1P08559 390 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 NME1P15531 152 aaKnown RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 TSHRP16473 764 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 JUNDP17535 347 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 PTPN3P26045 913 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 TEAD1P28347 426 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 HNF1BP35680 557 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 IGFALSP35858 605 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 CD86P42081 329 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 ATP5OP48047 213 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 DUSP3P51452 185 aaPredicted RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 EMP3P54852 163 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 IL9RQ01113 521 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 PPARDQ03181 441 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 DPTQ07507 201 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 NIPAL4Q0D2K0 466 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 ZBTB17Q13105 803 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 ILKQ13418 452 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 PRKD1Q15139 912 aaPredicted RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 IRF4Q15306 451 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 FAXCQ5TGI0 409 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 ESRP1Q6NXG1 681 aaKnown RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 PNCKQ6P2M8 343 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 LVRNQ6Q4G3 990 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 MACC1Q6ZN28 852 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 KANSL1Q7Z3B3 1105 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 ZC3H18Q86VM9 953 aaKnown RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 GATAD2AQ86YP4 633 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 SLC22A18ASQ8N1D0 253 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 SLC25A45Q8N413 288 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.49□□□□□ -1.05
TPM1-213ENST00000558400 EID2Q8N6I1 236 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 BAHD1Q8TBE0 780 aaPredicted RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 SCG3Q8WXD2 468 aaKnown RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 ADAMTS14Q8WXS8 1223 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 COQ10AQ96MF6 247 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 PPP1R2P1Q96PQ5 205 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 TDRD1Q9BXT4 1180 aaKnown RBP8.49□□□□□ -1.05
TPM1-213ENST00000558400 CDH19Q9H159 772 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 USP29Q9HBJ7 922 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 GLOD4Q9HC38 313 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 MAGEE1Q9HCI5 957 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 RAD18Q9NS91 495 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 NLGN3Q9NZ94 848 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 FAM153AQ9UHL3 310 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 CHKBQ9Y259 395 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 COQ6Q9Y2Z9 468 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 NAV2Q8IVL1 2488 aa8.49□□□□□ -1.05
TPM1-213ENST00000558400 SPAARA0A1B0GVQ0 90 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ENC1O14682 589 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 RASGRP1O95267 797 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ZIC2O95409 532 aaPredicted RBP8.48□□□□□ -1.05
TPM1-213ENST00000558400 TNFP01375 233 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 PRKCGP05129 697 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 MMP2P08253 660 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ALPIP09923 528 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 FTH1P19P0C7X4 201 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 RBP3P10745 1247 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 PYGMP11217 842 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 CTSEP14091 401 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 PECAM1P16284 738 aaPredicted RBP8.48□□□□□ -1.05
TPM1-213ENST00000558400 CKMT2P17540 419 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 MARCKSL1P49006 195 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 KIAA1024LP59773 190 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 SKOR1P84550 965 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 E2F1Q01094 437 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 PTSQ03393 145 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 CDK18Q07002 472 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ADCY2Q08462 1091 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 PEX6Q13608 980 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 NFATC4Q14934 902 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 NOMO1Q15155 1222 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 LLGL1Q15334 1064 aa8.48□□□□□ -1.05
TPM1-213ENST00000558400 ELOCQ15369 112 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms