RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 FANCEQ9HB96 536 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 APOBEC3GQ9HC16 384 aaKnown RBP10.92□□□□□ -0.66
USP3-206ENST00000558157 CACNA2D2Q9NY47 1150 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 MTRRQ9UBK8 725 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 IPPQ9Y573 584 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 CROCCQ5TZA2 2017 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 PRORSD1PA6NEY8 169 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 C16orf96A6NNT2 1141 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 GPR182O15218 404 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 PQBP1O60828 265 aaKnown RBP10.91□□□□□ -0.66
USP3-206ENST00000558157 UGT2B11O75310 529 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 ALX3O95076 343 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 AMHP03971 560 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 CD1EP15812 388 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 TNK2Q07912 1038 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 MBTPS1Q14703 1052 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 WDR45BQ5MNZ6 344 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 RBM48Q5RL73 367 aaKnown RBP10.91□□□□□ -0.66
USP3-206ENST00000558157 TAS2R42Q7RTR8 314 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 LINC00523Q86TU6 105 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 EPHX4Q8IUS5 362 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 ZCCHC7Q8N3Z6 543 aaKnown RBP10.91□□□□□ -0.66
USP3-206ENST00000558157 ANKRD52Q8NB46 1076 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 BEST2Q8NFU1 509 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 SUN5Q8TC36 379 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 KIF12Q96FN5 646 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 MAELQ96JY0 434 aaKnown RBP10.91□□□□□ -0.66
USP3-206ENST00000558157 GATA5Q9BWX5 397 aaPredicted RBP10.91□□□□□ -0.66
USP3-206ENST00000558157 ANKHQ9HCJ1 492 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 SNX15Q9NRS6 342 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 USP18Q9UMW8 372 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 PCDHGA11Q9Y5H2 935 aa10.91□□□□□ -0.66
USP3-206ENST00000558157 EVPLLA8MZ36 301 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 NEMP1O14524 444 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 CST3P01034 146 aaPredicted RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 CD4P01730 458 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 PGAM1P18669 254 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 PSMA4P25789 261 aaKnown RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 MZF1P28698 734 aaPredicted RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 BMPR1AP36894 532 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 MYL6P60660 151 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 PHC1P78364 1004 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 BST2Q10589 180 aaKnown RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 STILQ15468 1287 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 DLG2Q15700 870 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 PGS1Q32NB8 556 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 LRIT3Q3SXY7 679 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 CYBRD1Q53TN4 286 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 TBCELQ5QJ74 424 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 LIPMQ5VYY2 423 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 FAAH2Q6GMR7 532 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 XAF1Q6GPH4 301 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 BTLAQ7Z6A9 289 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 CLEC14AQ86T13 490 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 CDKL3Q8IVW4 592 aaPredicted RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 MFSD4AQ8N468 514 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 C1orf127Q8N9H9 656 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 CANT1Q8WVQ1 401 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 FKBP10Q96AY3 582 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 SNX18Q96RF0 628 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 NEK6Q9HC98 313 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 RNF19AQ9NV58 838 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 KLK14Q9P0G3 267 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 SIX4Q9UIU6 781 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 SLC27A5Q9Y2P5 690 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 UGT2A1Q9Y4X1 527 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 MN1Q10571 1320 aaPredicted RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 DHRS12A0PJE2 317 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 BCAS1O75363 584 aaPredicted RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 GSNP06396 782 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 BMP1P13497 986 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 CXCR2P25025 360 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 MPSTP25325 297 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 MIPP30301 263 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 SPRP35270 261 aaPredicted RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 ARCN1P48444 511 aaKnown RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 GNG2P59768 71 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 IFITM3Q01628 133 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 SEMA5AQ13591 1074 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 SKIV2LQ15477 1246 aaKnown RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 CCDC14Q49A88 953 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 ZNF394Q53GI3 561 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 GLRA4Q5JXX5 417 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 C8orf82Q6P1X6 216 aaPredicted RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 CRTC3Q6UUV7 619 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 PTAR1Q7Z6K3 402 aaPredicted RBP10.9□□□□□ -0.66
USP3-206ENST00000558157 MPP5Q8N3R9 675 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 RNF157Q96PX1 679 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 CPXM1Q96SM3 734 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 CSF3RQ99062 836 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 MUC3BQ9H195 1237 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 LHX5Q9H2C1 402 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 PLEKHA5Q9HAU0 1116 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 CHST12Q9NRB3 414 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 FAM105AQ9NUU6 356 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 ASNSD1Q9NWL6 643 aa10.9□□□□□ -0.66
USP3-206ENST00000558157 SYCE1LA8MT33 242 aa10.89□□□□□ -0.67
USP3-206ENST00000558157 RFPL2O75678 378 aa10.89□□□□□ -0.67
USP3-206ENST00000558157 ASS1P00966 412 aaKnown RBP10.89□□□□□ -0.67
USP3-206ENST00000558157 ITGB3P05106 788 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms