RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 NPIPB15A6NHN6 443 aaPredicted RBP16.36■□□□□ 0.21
RPL28-205ENST00000558131 HEXIM1O94992 359 aaKnown RBP16.36■□□□□ 0.21
RPL28-205ENST00000558131 SOD1P00441 154 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 CEACAM5P06731 702 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 MYCLP1P12525 358 aaPredicted RBP16.36■□□□□ 0.21
RPL28-205ENST00000558131 PNLIPP16233 465 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 AMPD1P23109 780 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 SLC5A2P31639 672 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 ANP32AP39687 249 aaKnown RBP16.36■□□□□ 0.21
RPL28-205ENST00000558131 LY6DQ14210 128 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 IHHQ14623 411 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 SPECC1LQ69YQ0 1117 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 ZNF438Q7Z4V0 828 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 HSD11B1LQ7Z5J1 315 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 GPBAR1Q8TDU6 330 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 NUS1Q96E22 293 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 CCDC97Q96F63 343 aaPredicted RBP16.36■□□□□ 0.21
RPL28-205ENST00000558131 DTD2Q96FN9 168 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 MCCC1Q96RQ3 725 aaPredicted RBP16.36■□□□□ 0.21
RPL28-205ENST00000558131 TEX101Q9BY14 249 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 FRMD8Q9BZ67 464 aaPredicted RBP16.36■□□□□ 0.21
RPL28-205ENST00000558131 ZWILCHQ9H900 591 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 NOD2Q9HC29 1040 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 CYP4F12Q9HCS2 524 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.36■□□□□ 0.21
RPL28-205ENST00000558131 MYO1AQ9UBC5 1043 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 COL6A6A6NMZ7 2263 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 SDK2Q58EX2 2172 aa16.36■□□□□ 0.21
RPL28-205ENST00000558131 A0A0U1RQS6 177 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.35■□□□□ 0.21
RPL28-205ENST00000558131 B4DGG1 531 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 CPP00450 1065 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 RARAP10276 462 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 ITIH1P19827 911 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 IL4RP24394 825 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 VIPR1P32241 457 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 PBX1P40424 430 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 ETV5P41161 510 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 ETV3P41162 512 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 RENBPP51606 427 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 MAXP61244 160 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 POLR2LP62875 67 aaKnown RBP16.35■□□□□ 0.21
RPL28-205ENST00000558131 B4GALNT1Q00973 533 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 KLHL30Q0D2K2 578 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 NR1I3Q14994 352 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 NR1D2Q14995 579 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 IQCB1Q15051 598 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 ACOX1Q15067 660 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 TGIF1Q15583 401 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 FIGNQ5HY92 759 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 TAF8Q7Z7C8 310 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 TSPAN33Q86UF1 283 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 HEATR4Q86WZ0 1026 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 FBXO39Q8N4B4 442 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 NIPA2Q8N8Q9 360 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 FAM46DQ8NEK8 389 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 FAM71BQ8TC56 605 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 BTBD6Q96KE9 485 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 SMIM14Q96QK8 99 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 PCDH18Q9HCL0 1135 aa16.35■□□□□ 0.21
RPL28-205ENST00000558131 SPATS2LQ9NUQ6 558 aaKnown RBP16.35■□□□□ 0.21
RPL28-205ENST00000558131 H3BRJ5 948 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 NUDT21O43809 227 aaKnown RBP16.34■□□□□ 0.21
RPL28-205ENST00000558131 FZD6O60353 706 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 MYBL1P10243 752 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 CCNB1P14635 433 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 KELP23276 732 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 HSPA9P38646 679 aaKnown RBP16.34■□□□□ 0.21
RPL28-205ENST00000558131 MAZP56270 477 aaKnown RBP16.34■□□□□ 0.21
RPL28-205ENST00000558131 CDK3Q00526 305 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 ZNF235Q14590 738 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 TAF1BQ53T94 588 aaPredicted RBP16.34■□□□□ 0.21
RPL28-205ENST00000558131 TMCO3Q6UWJ1 677 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 RFLNAQ6ZTI6 216 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 Q8N9G6 341 aaPredicted RBP16.34■□□□□ 0.21
RPL28-205ENST00000558131 TEKT4Q8WW24 435 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 HSPH1Q92598 858 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 TRIM11Q96F44 468 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 TMEM74Q96NL1 305 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 LRIT1Q9P2V4 623 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 PPIL1Q9Y3C6 166 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 LOXL2Q9Y4K0 774 aa16.34■□□□□ 0.21
RPL28-205ENST00000558131 B4GAT1O43505 415 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 PGLSO95336 258 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 FGF1P05230 155 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 PDHA1P08559 390 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 CD48P09326 243 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 ARSEP51690 589 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 C16orf72Q14CZ0 275 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 ZSCAN23Q3MJ62 389 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 CCDC81Q6ZN84 652 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 TECPR1Q7Z6L1 1165 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 CPNE8Q86YQ8 564 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 TEX26Q8N6G2 289 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 PDCD6IPQ8WUM4 868 aaKnown RBP16.33■□□□□ 0.2
RPL28-205ENST00000558131 PIH1D2Q8WWB5 315 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 PATE1Q8WXA2 126 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 CCNL2Q96S94 520 aaPredicted RBP16.33■□□□□ 0.2
RPL28-205ENST00000558131 STRADBQ9C0K7 418 aa16.33■□□□□ 0.2
RPL28-205ENST00000558131 NAT10Q9H0A0 1025 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms