RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ZNF84P51523 738 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 TKTL1P51854 596 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 LUMP51884 338 aaPredicted RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 COPB1P53618 953 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 GP2P55259 537 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 TAS2R40P59535 323 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 MRPS34P82930 218 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 HMGN5P82970 282 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 KLHL30Q0D2K2 578 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 GRSF1Q12849 480 aaKnown RBP eCLIP3.85□□□□□ -1.79
TDP1-217ENST00000557782 CRHR2Q13324 411 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 KRT33BQ14525 404 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 PGM5Q15124 567 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 RABEP1Q15276 862 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 MYLK3Q32MK0 819 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 LEXMQ3ZCV2 418 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 PLK5Q496M5 336 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 SLC39A12Q504Y0 691 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 ZNF385BQ569K4 471 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 RABL3Q5HYI8 236 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 PLA2G4FQ68DD2 849 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 TMEM211Q6ICI0 200 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 ANKRD16Q6P6B7 361 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 VWA1Q6PCB0 445 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 DHRS13Q6UX07 377 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 Q6ZRM9 215 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 HAUS6Q7Z4H7 955 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 WDR5BQ86VZ2 330 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 MAML2Q8IZL2 1156 aaPredicted RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 FUKQ8N0W3 1084 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 PAQR4Q8N4S7 273 aaPredicted RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 LINC01465Q8N7H1 131 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 LINC01356Q8N9X3 169 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 OR8K5Q8NH50 307 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 GRAPLQ8TC17 118 aaPredicted RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 HASPINQ8TF76 798 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 PTCD3Q96EY7 689 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 RRNAD1Q96FB5 475 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 GNRHR2Q96P88 292 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 GAL3ST4Q96RP7 486 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 PKP4Q99569 1192 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 INPP5KQ9BT40 448 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 C1QTNF5Q9BXJ0 243 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 ZNF341Q9BYN7 854 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 NUAK2Q9H093 628 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 MEGF9Q9H1U4 602 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 SLCO5A1Q9H2Y9 848 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 NOL11Q9H8H0 719 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 SLC28A3Q9HAS3 691 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 TXNRD2Q9NNW7 524 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 AKIP1Q9NQ31 210 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 ERAP1Q9NZ08 941 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 TFCP2L1Q9NZI6 479 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 CNIH4Q9P003 139 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 SEMA5BQ9P283 1151 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 ANKFY1Q9P2R3 1169 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 CPSF3Q9UKF6 684 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 APPL1Q9UKG1 709 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 FBXO4Q9UKT5 387 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 DUSP12Q9UNI6 340 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 ZFR2Q9UPR6 939 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 PIN4Q9Y237 131 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 KCTD3Q9Y597 815 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 XDHP47989 1333 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 SPATA31A5Q5VU36 1347 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 SPATA31A6Q5VVP1 1343 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 EMSYQ7Z589 1322 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 SPATA31A7Q8IWB4 1347 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 AHRRA9YTQ3 701 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 FAM157AC9JC47 383 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 AKR1B15C9JRZ8 316 aaPredicted RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 H0YIN7 160 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 CLIC1O00299 241 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 ETV2O00321 342 aaPredicted RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 CLIC2O15247 247 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 LAMTOR5O43504 91 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 SLC25A17O43808 307 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 JRKO75564 520 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 HEXBP07686 556 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 CD63P08962 238 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 FURINP09958 794 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 LINGO3P0C6S8 592 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 FAM58BPP0C7Q3 252 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 NR2F6P10588 404 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 APEHP13798 732 aaKnown RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 PFKFB1P16118 471 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 NDUFB7P17568 137 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 TFEBP19484 476 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 KCNA5P22460 613 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 EEF1B2P24534 225 aaKnown RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 DDX6P26196 483 aaKnown RBP eCLIP3.84□□□□□ -1.79
TDP1-217ENST00000557782 ITPKBP27987 946 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 ACADLP28330 430 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 CHRNA5P30532 468 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 PRPHP41219 470 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 GPR143P51810 404 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 ST8SIA6P61647 398 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 SIRPAP78324 504 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 HTD2P86397 168 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 PPATQ06203 517 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms