RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TRIM23P36406 574 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 COILP38432 576 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-234ENST00000557703 STC1P52823 247 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 GDF10P55107 478 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 DCDC1P59894 354 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 IRX4P78413 519 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 PTSQ03393 145 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 SEMA5AQ13591 1074 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 FGL2Q14314 439 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 CNGA3Q16281 694 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 PDPK2PQ6A1A2 396 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 ESRP1Q6NXG1 681 aaKnown RBP13.7□□□□□ -0.22
SHMT2-234ENST00000557703 CCDC137Q6PK04 289 aaKnown RBP13.7□□□□□ -0.22
SHMT2-234ENST00000557703 TECPR1Q7Z6L1 1165 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 CREG2Q8IUH2 290 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.7□□□□□ -0.22
SHMT2-234ENST00000557703 IPMKQ8NFU5 416 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 DTD2Q96FN9 168 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 WRAP53Q9BUR4 548 aaKnown RBP13.7□□□□□ -0.22
SHMT2-234ENST00000557703 GDF3Q9NR23 364 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 EIF2B3Q9NR50 452 aaKnown RBP13.7□□□□□ -0.22
SHMT2-234ENST00000557703 GPR27Q9NS67 375 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 PCYOX1Q9UHG3 505 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 ITM2BQ9Y287 266 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 ANKRD6Q9Y2G4 727 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 PCDHGB2Q9Y5G2 931 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 CEP250Q9BV73 2442 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 DOCK9Q9BZ29 2069 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 C1orf232A0A0U1RR37 186 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 E7EVH7 732 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 NDC80O14777 642 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 SUN1O94901 812 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 ATXN1LP0C7T5 689 aaKnown RBP13.69□□□□□ -0.22
SHMT2-234ENST00000557703 TSHRP16473 764 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 HTR1BP28222 390 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 CTSKP43235 329 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 RXRGP48443 463 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 ARRB1P49407 418 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-234ENST00000557703 CSNK1EP49674 416 aaKnown RBP13.69□□□□□ -0.22
SHMT2-234ENST00000557703 PFN3P60673 137 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 SARNPP82979 210 aaKnown RBP13.69□□□□□ -0.22
SHMT2-234ENST00000557703 SNX1Q13596 522 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 ACOX1Q15067 660 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 PCSK7Q16549 785 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 CDKN3Q16667 212 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 LRRC66Q68CR7 880 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 TMC3Q7Z5M5 1100 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 TP53I13Q8NBR0 393 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-234ENST00000557703 BRSK1Q8TDC3 778 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 NETO1Q8TDF5 533 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 MS4A14Q96JA4 679 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 TBATAQ96M53 351 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 TBL1YQ9BQ87 522 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 C10orf88Q9H8K7 445 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 TMEM9BQ9NQ34 198 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 DNAAF2Q9NVR5 837 aaKnown RBP13.69□□□□□ -0.22
SHMT2-234ENST00000557703 UBP1Q9NZI7 540 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 GGT7Q9UJ14 662 aa13.69□□□□□ -0.22
SHMT2-234ENST00000557703 LNP1A1A4G5 178 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 C2orf81A6NN90 581 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 SMAPO00193 183 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 METTL18O95568 372 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 CRTAMO95727 393 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 THEGLP0DJG4 465 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 LHCGRP22888 699 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-234ENST00000557703 BLKP51451 505 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 NXPH1P58417 271 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 SUZ12Q15022 739 aaKnown RBP13.68□□□□□ -0.22
SHMT2-234ENST00000557703 ZNF423Q2M1K9 1284 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 WSCD2Q2TBF2 565 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 AASDHQ4L235 1098 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-234ENST00000557703 LRRC73Q5JTD7 316 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 SIRPB2Q5JXA9 342 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 SDR16C5Q8N3Y7 309 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 PEX13Q92968 403 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 NUS1Q96E22 293 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 BMFQ96LC9 184 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 SLC6A18Q96N87 628 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 PLEKHG4BQ96PX9 1271 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 AP1M1Q9BXS5 423 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 GPR63Q9BZJ6 419 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 PARD6AQ9NPB6 346 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 RAB6BQ9NRW1 208 aa13.68□□□□□ -0.22
SHMT2-234ENST00000557703 SPTY2D1-AS1A0A0U1RR47 76 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 TNFRSF10CO14798 259 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 ZNF185O15231 689 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 CLDN7O95471 211 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 ECEL1O95672 775 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 ALPIP09923 528 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 CTPS1P17812 591 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 ENGP17813 658 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 ITIH2P19823 946 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 RPL22P35268 128 aaKnown RBP13.67□□□□□ -0.22
SHMT2-234ENST00000557703 HADHAP40939 763 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 MAGEA6P43360 314 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 SPINT3P49223 89 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 THOP1P52888 689 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 CDH17Q12864 832 aa13.67□□□□□ -0.22
SHMT2-234ENST00000557703 GRIK2Q13002 908 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms