RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 RHOVQ96L33 236 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 TRIM56Q9BRZ2 755 aaKnown RBP5.92□□□□□ -1.46
VPS33B-207ENST00000557470 GTPBP4Q9BZE4 634 aaKnown RBP5.92□□□□□ -1.46
VPS33B-207ENST00000557470 TM6SF2Q9BZW4 377 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 CEP44Q9C0F1 390 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 INTS2Q9H0H0 1204 aaKnown RBP5.92□□□□□ -1.46
VPS33B-207ENST00000557470 TKTL2Q9H0I9 626 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 CDH19Q9H159 772 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 EPN3Q9H201 632 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ATP13A1Q9HD20 1204 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 MBNL1Q9NR56 388 aaKnown RBP5.92□□□□□ -1.46
VPS33B-207ENST00000557470 RMND1Q9NWS8 449 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ARHGEF38Q9NXL2 777 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 SEPT10Q9P0V9 454 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF69Q9UC07 566 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF212Q9UDV6 495 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 FOXD3Q9UJU5 478 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-207ENST00000557470 GPR34Q9UPC5 381 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 SCN8AQ9UQD0 1980 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 SPTBN1Q01082 2364 aaKnown RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 IGLV3-10A0A075B6K4 115 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 ILVBLA1L0T0 632 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 CLEC18AA5D8T8 446 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 DRGXA6NNA5 263 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 BECN2A8MW95 431 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 C9orf172C9J069 976 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 MSTNO14793 375 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 AREL1O15033 823 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 MMP20O60882 483 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 SRGAP2O75044 1071 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 CD160O95971 181 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 UGT2B4P06133 528 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 CR2P20023 1033 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 ANP32AP39687 249 aaKnown RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 CXCR3P49682 368 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 HK3P52790 923 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 YPEL5P62699 121 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 ZFP36L1Q07352 338 aaKnown RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 SLC20A2Q08357 652 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 PIN1Q13526 163 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 IRF4Q15306 451 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 ELOCQ15369 112 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 IGFBP7Q16270 282 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 SKIDA1Q1XH10 827 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 ALG11Q2TAA5 492 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF805Q5CZA5 627 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 BRMS1LQ5PSV4 323 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF468Q5VIY5 522 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 FBXW10Q5XX13 1052 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 KCTD16Q68DU8 428 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 RETSATQ6NUM9 610 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 GJB7Q6PEY0 223 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 LVRNQ6Q4G3 990 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 CLEC18BQ6UXF7 455 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 C11orf57Q6ZUT1 292 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 SLC26A9Q7LBE3 791 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 TMPRSS9Q7Z410 1059 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 DTX1Q86Y01 620 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 CCNJLQ8IV13 435 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 HID1Q8IV36 788 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 SLITRK4Q8IW52 837 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 DRC7Q8IY82 874 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 ALDH16A1Q8IZ83 802 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 FSTL5Q8N475 847 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 Q8N9G6 341 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 TP53I13Q8NBR0 393 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 CLEC18CQ8NCF0 446 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF564Q8TBZ8 553 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 USP7Q93009 1102 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 SNX21Q969T3 373 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 TSACCQ96A04 125 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 RAB7BQ96AH8 199 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 GSDMAQ96QA5 445 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 NPY6RQ99463 290 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 SLC30A3Q99726 388 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 LRRN3Q9H3W5 708 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 WDCPQ9H6R7 721 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 NPHS2Q9NP85 383 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 UBE2TQ9NPD8 197 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 HECAQ9UBI9 543 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-207ENST00000557470 MAPRE3Q9UPY8 281 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 ZDHHC9Q9Y397 364 aa5.91□□□□□ -1.46
VPS33B-207ENST00000557470 SPENQ96T58 3664 aaKnown RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 CENPEQ02224 2701 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 A0A1W2PQC6 194 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 KRIT1O00522 736 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 TOR1BO14657 336 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 PSMA7O14818 248 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 TM7SF2O76062 418 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ALPIP09923 528 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 CTSEP14091 401 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ITIH2P19823 946 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 CALRP27797 417 aaKnown RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ACVRL1P37023 503 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 USP8P40818 1118 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 SULT1E1P49888 294 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 BLKP51451 505 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 MAPK10P53779 464 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 POLE2P56282 527 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 RNASE9P60153 205 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms