RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 DTD2Q96FN9 168 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 FCRL5Q96RD9 977 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 LYSMD1Q96S90 227 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 SRPK1Q96SB4 655 aaKnown RBP12.5□□□□□ -0.41
SLIRP-209ENST00000557342 HERPUD2Q9BSE4 406 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 APOOQ9BUR5 198 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 FAM153AQ9UHL3 310 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 CACNB4O00305 520 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-209ENST00000557342 PDE2AO00408 941 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-209ENST00000557342 PIAS2O75928 621 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 PYGLP06737 847 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 HOXC4P09017 264 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-209ENST00000557342 NME1P15531 152 aaKnown RBP12.49□□□□□ -0.41
SLIRP-209ENST00000557342 TSHRP16473 764 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 JUNDP17535 347 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 GM2AP17900 193 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 NFKB1P19838 968 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 KELP23276 732 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 DGKAP23743 735 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 CD68P34810 354 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-209ENST00000557342 SIM1P81133 766 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-209ENST00000557342 MPP3Q13368 585 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 NFATC4Q14934 902 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 PCSK7Q16549 785 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 QPCTQ16769 361 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 N4BP2L1Q5TBK1 243 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-209ENST00000557342 LRRC66Q68CR7 880 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 PNCKQ6P2M8 343 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 KANSL1Q7Z3B3 1105 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 HSD11B1LQ7Z5J1 315 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 TSPAN33Q86UF1 283 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 NRSN1Q8IZ57 195 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 SPATA22Q8NHS9 363 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 CCHCR1Q8TD31 782 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 TBATAQ96M53 351 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 PPP1R2P1Q96PQ5 205 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 TRIB3Q96RU7 358 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 FTSJ1Q9UET6 329 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 RSPH14Q9UHP6 348 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 BTBD3Q9Y2F9 522 aa12.49□□□□□ -0.41
SLIRP-209ENST00000557342 C1orf232A0A0U1RR37 186 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 SPAARA0A1B0GVQ0 90 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-209ENST00000557342 KCNN4O15554 427 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 ZSCAN12O43309 604 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 TNFSF14O43557 240 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 SDC3O75056 442 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 PMPCBO75439 489 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 ANXA9O76027 345 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 TRIM16O95361 564 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 LDOC1O95751 146 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-209ENST00000557342 NDST3O95803 873 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 MT-CYBP00156 380 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-209ENST00000557342 EPOP01588 193 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 ALPPL2P10696 532 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 TEAD1P28347 426 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 TRIM23P36406 574 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 ETV3P41162 512 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 STC1P52823 247 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 GEMP55040 296 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 KIAA1024LP59773 190 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 PPARDQ03181 441 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 PTSQ03393 145 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 DPTQ07507 201 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 EIF2B5Q13144 721 aaKnown RBP12.48□□□□□ -0.41
SLIRP-209ENST00000557342 KLF1Q13351 362 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-209ENST00000557342 GALNT3Q14435 633 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 PRPSAP1Q14558 356 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 ZNF542PQ5EBM4 170 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 FAXCQ5TGI0 409 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 ENPP7Q6UWV6 458 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 Q6ZVL8 140 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 ZNF765Q7L2R6 523 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 TECPR1Q7Z6L1 1165 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 NLRP8Q86W28 1048 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 EID2Q8N6I1 236 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 PLA2G15Q8NCC3 412 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 WDR92Q96MX6 357 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 DUSP23Q9BVJ7 150 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 FRMD8P1Q9BZ68 369 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-209ENST00000557342 SLC13A1Q9BZW2 595 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 GBA3Q9H227 469 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 CARD9Q9H257 536 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 WDR26Q9H7D7 661 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 MAGEE1Q9HCI5 957 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 PHPT1Q9NRX4 125 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-209ENST00000557342 PKD2L2Q9NZM6 624 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 SPASTQ9UBP0 616 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 APOBEC2Q9Y235 224 aaKnown RBP12.48□□□□□ -0.41
SLIRP-209ENST00000557342 OR1A2Q9Y585 309 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 CSNK1G3Q9Y6M4 447 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 SCN8AQ9UQD0 1980 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 DNAH14Q0VDD8 3507 aa12.48□□□□□ -0.41
SLIRP-209ENST00000557342 RGSL1A5PLK6 1076 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 GOLGA6CA6NDK9 693 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 GOLGA6BA6NDN3 693 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 GOLGA8CPA6NN73 597 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 RASGRP1O95267 797 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 CLDN7O95471 211 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 C1SP09871 688 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms