RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 BICDL2A1A5D9 508 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 RASA4BC9J798 803 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 TEX33O43247 280 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 RASA4O43374 803 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 TCN2P20062 427 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 YBEYP58557 167 aaPredicted RBP12.55□□□□□ -0.4
PSEN1-221ENST00000557293 RAB15P59190 212 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 CTBSQ01459 385 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 EXOC3L4Q17RC7 722 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 FHL5Q5TD97 284 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 ERAP2Q6P179 960 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 BRAT1Q6PJG6 821 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 PHLDB2Q86SQ0 1253 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 FAM129CQ86XR2 697 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 DNAAF5Q86Y56 855 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 NRSN1Q8IZ57 195 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 RTL3Q8N8U3 475 aaKnown RBP12.55□□□□□ -0.4
PSEN1-221ENST00000557293 GALNT11Q8NCW6 608 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 CCDC112Q8NEF3 446 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 JOSD2Q8TAC2 188 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 RXFP2Q8WXD0 754 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 ECHDC3Q96DC8 303 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 COQ10AQ96MF6 247 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 TEFMQ96QE5 360 aaKnown RBP12.55□□□□□ -0.4
PSEN1-221ENST00000557293 EFHD1Q9BUP0 239 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 TEX101Q9BY14 249 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 PDFQ9HBH1 243 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 PRDM8Q9NQV8 689 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 FBXO8Q9NRD0 319 aa12.55□□□□□ -0.4
PSEN1-221ENST00000557293 A8MX80 341 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 J3KR12 359 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 CYP11B1P15538 503 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 POU3F2P20265 443 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-221ENST00000557293 CSNK1DP48730 415 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 POLD2P49005 469 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 HDAC4P56524 1084 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 MC1RQ01726 317 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 GRM3Q14832 879 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 CDO1Q16878 200 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 TSR1Q2NL82 804 aaKnown RBP12.54□□□□□ -0.4
PSEN1-221ENST00000557293 SLC30A9Q6PML9 568 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 ASB18Q6ZVZ8 466 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 DPPA4Q7L190 304 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 SRLQ86TD4 932 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 HSCBQ8IWL3 235 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 CCDC13Q8IYE1 715 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 ELOA2Q8IYF1 753 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-221ENST00000557293 GPT2Q8TD30 523 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 CPA5Q8WXQ8 436 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 KIAA1143Q96AT1 154 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-221ENST00000557293 DPYSL5Q9BPU6 564 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 GSDMCQ9BYG8 508 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 WDR26Q9H7D7 661 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 SUDS3Q9H7L9 328 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-221ENST00000557293 METTL5Q9NRN9 209 aaKnown RBP12.54□□□□□ -0.4
PSEN1-221ENST00000557293 TLK1Q9UKI8 766 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 SUFUQ9UMX1 484 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 MED13Q9UHV7 2174 aa12.54□□□□□ -0.4
PSEN1-221ENST00000557293 GTPBP10A4D1E9 387 aaKnown RBP12.53□□□□□ -0.4
PSEN1-221ENST00000557293 C2CD4BA6NLJ0 364 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 A8MU76 341 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 WASH4PA8MWX3 477 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 TRAFD1O14545 582 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-221ENST00000557293 ZW10O43264 779 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 STK17BO94768 372 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 MYCLP1P12525 358 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-221ENST00000557293 ADCY8P40145 1251 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 STAT5AP42229 794 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 BPIFB4P59827 614 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 NOMO3P69849 1222 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 ILF3Q12906 894 aaKnown RBP eCLIP12.53□□□□□ -0.4
PSEN1-221ENST00000557293 SEPT6Q14141 434 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 TAF3Q5VWG9 929 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 NOP9Q86U38 636 aaKnown RBP12.53□□□□□ -0.4
PSEN1-221ENST00000557293 ZNF761Q86XN6 746 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-221ENST00000557293 ZNF354CQ86Y25 554 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 UMODL1-AS1Q8N2C9 162 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 NTAN1Q96AB6 310 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 SCARF2Q96GP6 870 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-221ENST00000557293 TUBGCP5Q96RT8 1024 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 KCTD3Q9Y597 815 aa12.53□□□□□ -0.4
PSEN1-221ENST00000557293 ANKRD17O75179 2603 aaKnown RBP12.52□□□□□ -0.4
PSEN1-221ENST00000557293 SHANK1Q9Y566 2161 aa12.52□□□□□ -0.4
PSEN1-221ENST00000557293 TRBV23OR9-2A0A075B6M9 112 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 A1L4Q6 167 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 MKRN2OSH3BPM6 223 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 PDE2AO00408 941 aaPredicted RBP12.52□□□□□ -0.41
PSEN1-221ENST00000557293 BIN1O00499 593 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 VPS4BO75351 444 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 EML2O95834 649 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 ELFN1P0C7U0 828 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 ZNF28P17035 718 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 DCTP40126 519 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 PTPN9P43378 593 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 GNPDA1P46926 289 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 GPLD1P80108 840 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 PAK1Q13153 545 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 RAPGEF1Q13905 1077 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms