RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PGAP3Q96FM1 320 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 C8orf48Q96LL4 319 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 SERPINB12Q96P63 405 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 CSPG4P5Q96PW8 444 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 PEBP4Q96S96 227 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 KCNK16Q96T55 309 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 SMOQ99835 787 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 FAM118BQ9BPY3 351 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 TMEM121Q9BTD3 319 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 MRPL9Q9BYD2 267 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 BRD8Q9H0E9 1235 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 ZNF768Q9H5H4 540 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 DHX35Q9H5Z1 703 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 USP29Q9HBJ7 922 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 DMAP1Q9NPF5 467 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 PAK5Q9P286 719 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 PTGFRNQ9P2B2 879 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 FBXW11Q9UKB1 542 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 FZD10Q9ULW2 581 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 SHOC2Q9UQ13 582 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 VWA7Q9Y334 891 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 MSRB2Q9Y3D2 182 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 TRIM17Q9Y577 477 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 HEY1Q9Y5J3 304 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 PARP14Q460N5 1801 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 C5orf60A6NFR6 353 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 YJEFN3A6XGL0 299 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 GRXCR1A8MXD5 290 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 HHLA1C9JL84 531 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 E7ENQ6 273 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 H7C4K7 107 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 I3L4J1 428 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 NRP1O14786 923 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 CHADO15335 359 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 KCNN4O15554 427 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 MTSS1O43312 755 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 SHOX2O60902 331 aaPredicted RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 DDHD2O94830 711 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 FYNP06241 537 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ABHD2P08910 425 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ZSCAN5DPP0CG00 497 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 SLC2A3P11169 496 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 HNRNPLP14866 589 aaKnown RBP eCLIP4.56□□□□□ -1.68
SRP54-212ENST00000556992 ETS1P14921 441 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 PECAM1P16284 738 aaPredicted RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 NR1D1P20393 614 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 IBSPP21815 317 aaPredicted RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 BDNFP23560 247 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 CYP2F1P24903 491 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ZFP36P26651 326 aaKnown RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 HTR7P34969 479 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 PHBP35232 272 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 MDH1P40925 334 aaKnown RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 MAGEA11P43364 429 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 BRCC3P46736 316 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 OR1G1P47890 313 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 CXCR3P49682 368 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 VPS41P49754 854 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 MAGOHP61326 146 aaKnown RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 CDK16Q00536 496 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 IRF9Q00978 393 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 DMTNQ08495 405 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 SCAPQ12770 1279 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 NME3Q13232 169 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 MTA1Q13330 715 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 PDK1Q15118 436 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 RASA2Q15283 850 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 CA9Q16790 459 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 FAM214AQ32MH5 1076 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 PLEKHG4Q58EX7 1191 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 SLC45A4Q5BKX6 768 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 CLLU1OSQ5K130 101 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 RNASEH2BQ5TBB1 312 aaKnown RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 SYPL2Q5VXT5 272 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 BSPRYQ5W0U4 402 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 MFSD5Q6N075 450 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 VSTM1Q6UX27 236 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 TAOK1Q7L7X3 1001 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ANKRD33Q7Z3H0 272 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 BNIPLQ7Z465 357 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 LRRTM3Q86VH5 581 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 MON1AQ86VX9 555 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ZNF280BQ86YH2 543 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 UNC45BQ8IWX7 931 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 BEND2Q8NDZ0 799 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 DBF4BQ8NFT6 615 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 OR2W6PQ8NHA6 318 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 CLEC4CQ8WTT0 213 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 PYROXD1Q8WU10 500 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 TFB1MQ8WVM0 346 aaKnown RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 MYLPFQ96A32 169 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 CENPTQ96BT3 561 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ZBTB9Q96C00 473 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 TLCD1Q96CP7 247 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ZNF764Q96H86 408 aaPredicted RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 SCLYQ96I15 445 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 FUBP3Q96I24 572 aaKnown RBP eCLIP4.56□□□□□ -1.68
SRP54-212ENST00000556992 PIWIL1Q96J94 861 aaKnown RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 CEP295NLQ96MC4 621 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ZNF512Q96ME7 567 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms