RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SERPINA4P29622 427 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 CSF2RBP32927 897 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 CSTF2P33240 577 aaKnown RBP eCLIP9.04□□□□□ -0.962e-10■■□□□ 11.7
HNRNPC-227ENST00000556897 RFC1P35251 1148 aaPredicted RBP9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 STAT1P42224 750 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 GNPDA1P46926 289 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 LIMK2P53671 638 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 ILF3Q12906 894 aaKnown RBP eCLIP9.04□□□□□ -0.963e-7■■■□□ 14.8
HNRNPC-227ENST00000556897 TRA2AQ13595 282 aaKnown RBP eCLIP9.04□□□□□ -0.966e-8■■□□□ 13.3
HNRNPC-227ENST00000556897 ACOX1Q15067 660 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 CLPPQ16740 277 aaPredicted RBP9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 TPD52L1Q16890 204 aaPredicted RBP9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 TSR1Q2NL82 804 aaKnown RBP9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 C4orf17Q53FE4 359 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 HSP90AA4PQ58FG1 418 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 AFMIDQ63HM1 303 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 ANKS6Q68DC2 871 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 PNCKQ6P2M8 343 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 SCYL2Q6P3W7 929 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 SLC30A9Q6PML9 568 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 FAM129CQ86XR2 697 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 UMODL1-AS1Q8N2C9 162 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 PAF1Q8N7H5 531 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 TSEN2Q8NCE0 465 aaKnown RBP9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 CCDC112Q8NEF3 446 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 OR4D9Q8NGE8 314 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 PTCD2Q8WV60 388 aaKnown RBP9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 CATSPER2Q96P56 530 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 PSMG3-AS1Q96PY0 264 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 GSDMCQ9BYG8 508 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 ASPSCR1Q9BZE9 553 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 ATP13A3Q9H7F0 1226 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 CATSPERBQ9H7T0 1116 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 OCIAD1Q9NX40 245 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 SLC39A1Q9NY26 324 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 TMEM9Q9P0T7 183 aa9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 NOCTQ9UK39 431 aaKnown RBP9.04□□□□□ -0.96
HNRNPC-227ENST00000556897 CREBBPQ92793 2442 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 BLACEA4D250 179 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 EFCAB7A8K855 629 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 WASH4PA8MWX3 477 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 B4E171 279 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 PDE2AO00408 941 aaPredicted RBP9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 PES1O00541 588 aaKnown RBP9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 PPM1DO15297 605 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 DUX1O43812 170 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 PRAMEF11O60813 436 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 PALMO75781 387 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 GFPT2O94808 682 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 CEACAM5P06731 702 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 KRT3P12035 628 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 CHRNB2P17787 502 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 GPD1P21695 349 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 TSPAN7P41732 249 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 GPR3P46089 330 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 FMO1Q01740 532 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 CDR2Q01850 454 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 CAMK4Q16566 473 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 DCAF12Q5T6F0 453 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 WDR59Q6PJI9 974 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 DPPA4Q7L190 304 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 SRLQ86TD4 932 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 HEATR4Q86WZ0 1026 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 NRSN1Q8IZ57 195 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 UNC5BQ8IZJ1 945 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 NAGSQ8N159 534 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 ECHDC3Q96DC8 303 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 ABHD17AQ96GS6 310 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 CELF6Q96J87 481 aaKnown RBP9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 SLC45A3Q96JT2 553 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 TUBGCP2Q9BSJ2 902 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 STK33Q9BYT3 514 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 LRRC19Q9H756 370 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 GPN2Q9H9Y4 310 aaPredicted RBP9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 TRNAU1APQ9NX07 287 aaKnown RBP9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 KCNK4Q9NYG8 393 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 KIAA1468Q9P260 1216 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 PILRAQ9UKJ1 303 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 SUFUQ9UMX1 484 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 ST14Q9Y5Y6 855 aa9.03□□□□□ -0.96
HNRNPC-227ENST00000556897 IGHV1OR21-1A0A087WYE8 117 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 PRR19A6NJB7 356 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 TRAFD1O14545 582 aaPredicted RBP9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 FGF10O15520 208 aaPredicted RBP9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 CCP110O43303 1012 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 OAS2P29728 719 aaKnown RBP9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 CSNK1DP48730 415 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 POLD2P49005 469 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 RAB15P59190 212 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 POLR2LP62875 67 aaKnown RBP9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 CDK3Q00526 305 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 CTBSQ01459 385 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 BCL2L1Q07817 233 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 CDC20Q12834 499 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 PTP4A2Q12974 167 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 DEFB109BQ30KR1 87 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 DENND2CQ68D51 928 aa9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 ZNF761Q86XN6 746 aaPredicted RBP9.02□□□□□ -0.97
HNRNPC-227ENST00000556897 ZNF677Q86XU0 584 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms