RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 H3BM21 787 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 ETV3P41162 512 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 NFATC4Q14934 902 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 DENND2CQ68D51 928 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 SLC25A45Q8N413 288 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 EID2Q8N6I1 236 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 SPATA22Q8NHS9 363 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 LZTFL1Q9NQ48 299 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 UCKL1Q9NWZ5 548 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 FTSJ1Q9UET6 329 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 KLF15Q9UIH9 416 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 TRHDEQ9UKU6 1024 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 OR1A2Q9Y585 309 aa22.87■■□□□ 1.25
TDP1-216ENST00000556867 ANKRD66B4E2M5 251 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 TNFSF14O43557 240 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 MT-CYBP00156 380 aaPredicted RBP22.86■■□□□ 1.25
TDP1-216ENST00000556867 RBP3P10745 1247 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 NFKB1P19838 968 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 RBL1P28749 1068 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 TRIM23P36406 574 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 STC1P52823 247 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 KIAA1024LP59773 190 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 EIF3EP60228 445 aaKnown RBP22.86■■□□□ 1.25
TDP1-216ENST00000556867 KLF1Q13351 362 aaPredicted RBP22.86■■□□□ 1.25
TDP1-216ENST00000556867 PNCKQ6P2M8 343 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 Q6ZVL8 140 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 TECPR1Q7Z6L1 1165 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 RAVER1Q8IY67 606 aaKnown RBP22.86■■□□□ 1.25
TDP1-216ENST00000556867 TTC13Q8NBP0 860 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 TBATAQ96M53 351 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 FERMT1Q9BQL6 677 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 MLPHQ9BV36 600 aaPredicted RBP22.86■■□□□ 1.25
TDP1-216ENST00000556867 CAAP1Q9H8G2 361 aa22.86■■□□□ 1.25
TDP1-216ENST00000556867 PNMA8BQ9ULN7 279 aaPredicted RBP22.86■■□□□ 1.25
TDP1-216ENST00000556867 GOLGA4Q13439 2230 aaKnown RBP22.85■■□□□ 1.25
TDP1-216ENST00000556867 A0A0U1RQS6 177 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 GOLGA6L9A6NEM1 432 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 GOLGA8CPA6NN73 597 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 ZNF189O75820 626 aaPredicted RBP22.85■■□□□ 1.25
TDP1-216ENST00000556867 HOXC4P09017 264 aaPredicted RBP22.85■■□□□ 1.25
TDP1-216ENST00000556867 FTH1P19P0C7X4 201 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 JUNDP17535 347 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 HTR1BP28222 390 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 PTSQ03393 145 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 CDK18Q07002 472 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 GALNT3Q14435 633 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 PID1Q7Z2X4 250 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 PHACTR4Q8IZ21 702 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 PELI3Q8N2H9 469 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 ZNF548Q8NEK5 533 aaPredicted RBP22.85■■□□□ 1.25
TDP1-216ENST00000556867 ATL2Q8NHH9 583 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 BTN2A2Q8WVV5 523 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 FUBP1Q96AE4 644 aaKnown RBP22.85■■□□□ 1.25
TDP1-216ENST00000556867 ALS2CR12Q96Q35 445 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 FCRL5Q96RD9 977 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 WDR26Q9H7D7 661 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 C10orf88Q9H8K7 445 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 TOR4AQ9NXH8 423 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 FAM153AQ9UHL3 310 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 APOBEC2Q9Y235 224 aaKnown RBP22.85■■□□□ 1.25
TDP1-216ENST00000556867 PPP2R2CQ9Y2T4 447 aa22.85■■□□□ 1.25
TDP1-216ENST00000556867 K7ESM1 405 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 NDST3O95803 873 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 PTMAP06454 111 aaKnown RBP22.84■■□□□ 1.25
TDP1-216ENST00000556867 C1SP09871 688 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 TSHRP16473 764 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 TEAD1P28347 426 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 PPARDQ03181 441 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 DPTQ07507 201 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 PCSK7Q16549 785 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 CDKN3Q16667 212 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 MEI1Q5TIA1 1274 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 KDELC1Q6UW63 502 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 ZNF765Q7L2R6 523 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 OR4C6Q8NH72 309 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 CNDP2Q96KP4 475 aaKnown RBP22.84■■□□□ 1.25
TDP1-216ENST00000556867 WDR92Q96MX6 357 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 FAM118BQ9BPY3 351 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 APOBEC3BQ9UH17 382 aaKnown RBP22.84■■□□□ 1.25
TDP1-216ENST00000556867 CSNK1G3Q9Y6M4 447 aa22.84■■□□□ 1.25
TDP1-216ENST00000556867 C1orf232A0A0U1RR37 186 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 NEMP2A6NFY4 417 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 CACNB4O00305 520 aaPredicted RBP22.83■■□□□ 1.25
TDP1-216ENST00000556867 SCAMP1O15126 338 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 PMPCBO75439 489 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 DKK1O94907 266 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 TRIM16O95361 564 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 CLDN7O95471 211 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 LDOC1O95751 146 aaPredicted RBP22.83■■□□□ 1.25
TDP1-216ENST00000556867 ATXN1LP0C7T5 689 aaKnown RBP22.83■■□□□ 1.25
TDP1-216ENST00000556867 GIMD1P0DJR0 217 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 ALG11Q2TAA5 492 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 DARS2Q6PI48 645 aaKnown RBP22.83■■□□□ 1.25
TDP1-216ENST00000556867 RBFAQ8N0V3 343 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 OXNAD1Q96HP4 312 aaPredicted RBP22.83■■□□□ 1.25
TDP1-216ENST00000556867 GBA3Q9H227 469 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 NLGN3Q9NZ94 848 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 UBP1Q9NZI7 540 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 SPASTQ9UBP0 616 aa22.83■■□□□ 1.25
TDP1-216ENST00000556867 RSPH14Q9UHP6 348 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms