RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 HSD11B1LQ7Z5J1 315 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 RHOT1Q8IXI2 618 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 SLC35F3Q8IY50 421 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 CCDC13Q8IYE1 715 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 TXLNBQ8N3L3 684 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 PAF1Q8N7H5 531 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 CNTD1Q8N815 330 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 DCBLD1Q8N8Z6 715 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 TSACCQ96A04 125 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-224ENST00000556737 NUS1Q96E22 293 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 SCRN2Q96FV2 425 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 WDR92Q96MX6 357 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 LGMNQ99538 433 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 IL12RB2Q99665 862 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 LGR4Q9BXB1 951 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 RBM22Q9NW64 420 aaKnown RBP eCLIP10.34□□□□□ -0.751e-9■■■■□ 20
SHMT2-224ENST00000556737 SALL4Q9UJQ4 1053 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 PPP2R2CQ9Y2T4 447 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 ANKRD11Q6UB99 2663 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-224ENST00000556737 CHD6Q8TD26 2715 aa10.34□□□□□ -0.75
SHMT2-224ENST00000556737 APC2O95996 2303 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 A0A0A6YYK5 440 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 A0A0J9YYE9 177 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 EME2A4GXA9 379 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 RCCD1A6NED2 376 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 TRABD2BA6NFA1 517 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 CAPN8A6NHC0 703 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 APOL1O14791 398 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 YY2O15391 372 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 PSTPIP1O43586 416 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 OPA1O60313 960 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 RASGRP1O95267 797 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 SOD1P00441 154 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 PRLP01236 227 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 TRBC1P01850 177 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 GP1BAP07359 652 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 HOXC4P09017 264 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 CYP2A6P11509 494 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 CTPS1P17812 591 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 CDKN2BP42772 138 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 MAGEA1P43355 309 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 NOP2P46087 812 aaKnown RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 MARCKSL1P49006 195 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 SRP54P61011 504 aaKnown RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 SKOR1P84550 965 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 TARDBPQ13148 414 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 ACOX1Q15067 660 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 CDKN3Q16667 212 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 ZFYVE27Q5T4F4 411 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 FAXCQ5TGI0 409 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 C11orf63Q6NUN7 778 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 PNCKQ6P2M8 343 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 CRTC1Q6UUV9 634 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 ENPP7Q6UWV6 458 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 MFSD7Q6UXD7 560 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 RFLNAQ6ZTI6 216 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 USP45Q70EL2 814 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 TECPR1Q7Z6L1 1165 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 HID1Q8IV36 788 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 CACTIN-AS1Q8N1I8 211 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 FSTL5Q8N475 847 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 KYQ8NBH2 561 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 OR56A4Q8NGH8 313 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 TPCN2Q8NHX9 752 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 IFI44Q8TCB0 444 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 KIAA1524Q8TCG1 905 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 RNF25Q96BH1 459 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 RBM15Q96T37 977 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 SLC13A1Q9BZW2 595 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 CCDC86Q9H6F5 360 aaKnown RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 WDR26Q9H7D7 661 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 LZTFL1Q9NQ48 299 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 DDX56Q9NY93 547 aaKnown RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 KLQ9UEF7 1012 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 REXO2Q9Y3B8 237 aaKnown RBP10.33□□□□□ -0.76
SHMT2-224ENST00000556737 TTLL3Q9Y4R7 772 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 PCDHA13Q9Y5I0 950 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 HEY1Q9Y5J3 304 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 ADGRG1Q9Y653 693 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 DGKBQ9Y6T7 804 aa10.33□□□□□ -0.76
SHMT2-224ENST00000556737 DSPP15924 2871 aaKnown RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 GOLGA6L9A6NEM1 432 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 CACNB4O00305 520 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 CASC3O15234 703 aaKnown RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 SPOPO43791 374 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 MT-CO3P00414 261 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 JCHAINP01591 159 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 MYCLP1P12525 358 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 PECAM1P16284 738 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 HTR1BP28222 390 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 TEAD1P28347 426 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 CD86P42081 329 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 BLKP51451 505 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 NAP1L1P55209 391 aaKnown RBP10.32□□□□□ -0.76
SHMT2-224ENST00000556737 DYNLT1P63172 113 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 ADCY2Q08462 1091 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 ITKQ08881 620 aa10.32□□□□□ -0.76
SHMT2-224ENST00000556737 PRKD1Q15139 912 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms