RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 GDPD5Q8WTR4 605 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 KLHL29Q96CT2 875 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 CLMNQ96JQ2 1002 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 KLHL15Q96M94 604 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 LBHD1Q9BQE6 289 aaPredicted RBP4.41□□□□□ -1.7
TRAV15-201ENST00000556680 SDF4Q9BRK5 362 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 PIMREGQ9BSJ6 248 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 R3HDMLQ9H3Y0 253 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 CXorf56Q9H5V9 222 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 AAMDCQ9H7C9 122 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 EIF2B3Q9NR50 452 aaKnown RBP4.41□□□□□ -1.7
TRAV15-201ENST00000556680 ZDHHC7Q9NXF8 308 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 CLDN16Q9Y5I7 305 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 SCINQ9Y6U3 715 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 CCDC171Q6TFL3 1326 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 RAD50Q92878 1312 aa4.41□□□□□ -1.7
TRAV15-201ENST00000556680 FSD2A1L4K1 749 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 TTC36A6NLP5 189 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 FOXO6A8MYZ6 492 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 H0YIN7 160 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 RNF113AO15541 343 aaKnown RBP4.4□□□□□ -1.71
TRAV15-201ENST00000556680 TNFSF14O43557 240 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 AKAP8O43823 692 aaKnown RBP4.4□□□□□ -1.71
TRAV15-201ENST00000556680 TACC1O75410 805 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 UFL1O94874 794 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 CLEC3BP05452 202 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 SLC2A4P14672 509 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 PSMA4P25789 261 aaKnown RBP4.4□□□□□ -1.71
TRAV15-201ENST00000556680 NFKBIAP25963 317 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 YWHAQP27348 245 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 TM4SF1P30408 202 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 ARHGAP25P42331 645 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 DPP6P42658 865 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 BLKP51451 505 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 CLCNKBP51801 687 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 PROK1P58294 105 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 RPS3AP61247 264 aaKnown RBP4.4□□□□□ -1.71
TRAV15-201ENST00000556680 NHLH1Q02575 133 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 FOXD4Q12950 439 aaPredicted RBP4.4□□□□□ -1.71
TRAV15-201ENST00000556680 MAMLD1Q13495 774 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 ERV3-1Q14264 604 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 RABEP1Q15276 862 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 TAF11Q15544 211 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 RPE65Q16518 533 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 MCMDC2Q4G0Z9 681 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 CFAP161Q6P656 301 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 KLHL24Q6TFL4 600 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 NEK10Q6ZWH5 1172 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 GPAT4Q86UL3 456 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 DDIASQ8IXT1 998 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 FAM185AQ8N0U4 392 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 CMASQ8NFW8 434 aaPredicted RBP4.4□□□□□ -1.71
TRAV15-201ENST00000556680 HDAC7Q8WUI4 952 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 ZG16BQ96DA0 208 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 SORCS2Q96PQ0 1159 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 HEMGNQ9BXL5 484 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 RANBP17Q9H2T7 1088 aaKnown RBP4.4□□□□□ -1.71
TRAV15-201ENST00000556680 SNTG1Q9NSN8 517 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 RAI14Q9P0K7 980 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 RAP2CQ9Y3L5 183 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 PSAT1Q9Y617 370 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 COX11Q9Y6N1 276 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 DDX60LQ5H9U9 1706 aaKnown RBP4.4□□□□□ -1.71
TRAV15-201ENST00000556680 ZNF804BA4D1E1 1349 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 KDM3AQ9Y4C1 1321 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 MED23Q9ULK4 1368 aa4.4□□□□□ -1.71
TRAV15-201ENST00000556680 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 KIR2DS5A0A0G2JLQ3 304 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 SMIM35A0A1B0GVV1 85 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 DYTNA2CJ06 578 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 EIF3CLB5ME19 914 aaKnown RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 FAM157AC9JC47 383 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 KIR2DS3K7RE56 304 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 TP73O15350 636 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 SLC25A17O43808 307 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 CCNDBP1O95273 360 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 LDHCP07864 332 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 ZFYP08048 801 aaPredicted RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 IRF1P10914 325 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 CASTP20810 708 aaKnown RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 ATP5F1P24539 256 aaPredicted RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 ALDH1B1P30837 517 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 RFC1P35251 1148 aaPredicted RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 CPOXP36551 454 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 HMGA2P52926 109 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 RPL7AP62424 266 aaKnown RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 ID2Q02363 134 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 GSTA3Q16772 222 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 ME3Q16798 604 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 SYTL3Q4VX76 610 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 MIDNQ504T8 468 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 ENTPD8Q5MY95 495 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 SERTAD4-AS1Q5TG53 156 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 SLC18B1Q6NT16 456 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 HMBOX1Q6NT76 420 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 CPLX2Q6PUV4 134 aaKnown RBP4.39□□□□□ -1.71
TRAV15-201ENST00000556680 ZNF793Q6ZN11 406 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 SLC46A3Q7Z3Q1 461 aa4.39□□□□□ -1.71
TRAV15-201ENST00000556680 ZNF589Q86UQ0 364 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms