RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 GSCP56915 257 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-221ENST00000556571 FMO1Q01740 532 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 BCL2L1Q07817 233 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 ACOX1Q15067 660 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 IGFBP7Q16270 282 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 SDK2Q58EX2 2172 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 SCYL2Q6P3W7 929 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 WDR59Q6PJI9 974 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 TRIM72Q6ZMU5 477 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 DPPA4Q7L190 304 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 NRROSQ86YC3 692 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 ART4Q93070 314 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 SLC45A3Q96JT2 553 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 SELENOOQ9BVL4 669 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 LRRC19Q9H756 370 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 PHPT1Q9NRX4 125 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-221ENST00000556571 KCTD5Q9NXV2 234 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 SLC39A1Q9NY26 324 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 TAAR2Q9P1P5 351 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 FZD10Q9ULW2 581 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 B3GALT1Q9Y5Z6 326 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 CLEC18AA5D8T8 446 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 SIGLEC16A6NMB1 481 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 B4E171 279 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 RAD1O60671 282 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 PALMO75781 387 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 GFPT2O94808 682 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 CEACAM5P06731 702 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 UNGP13051 313 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-221ENST00000556571 CHRNB2P17787 502 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 GM2AP17900 193 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 HTR7P34969 479 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 TSPAN7P41732 249 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 NSFP46459 744 aaKnown RBP11.89□□□□□ -0.51
ACTN1-221ENST00000556571 RGRP47804 291 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 RAB15P59190 212 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 NSUN2Q08J23 767 aaKnown RBP eCLIP11.89□□□□□ -0.51
ACTN1-221ENST00000556571 PTP4A2Q12974 167 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 NCAPHQ15003 741 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 DCAF12Q5T6F0 453 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 CLEC18BQ6UXF7 455 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 PELI3Q8N2H9 469 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 TSEN2Q8NCE0 465 aaKnown RBP11.89□□□□□ -0.51
ACTN1-221ENST00000556571 CLEC18CQ8NCF0 446 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 C3orf20Q8ND61 904 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 C9orf43Q8TAL5 461 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-221ENST00000556571 PMEPA1Q969W9 287 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 EFHD1Q9BUP0 239 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 TEX101Q9BY14 249 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 NUP62CLQ9H1M0 184 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 CLSTN2Q9H4D0 955 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 ADAM22Q9P0K1 906 aa11.89□□□□□ -0.51
ACTN1-221ENST00000556571 MYO9AB2RTY4 2548 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 IGHV1OR21-1A0A087WYE8 117 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 ANKRD62A6NC57 917 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 ARHGAP42A6NI28 874 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 A8MX80 341 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 TRAFD1O14545 582 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 PPM1DO15297 605 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 CCP110O43303 1012 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 FUCA1P04066 466 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 CALB1P05937 261 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 THRAP10827 490 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 AK4P27144 223 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 ERCC5P28715 1186 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 PAPOLAP51003 745 aaKnown RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 ZNF143P52747 638 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 TPI1P60174 286 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 NKAIN2Q5VXU1 208 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 TMEM71Q6P5X7 295 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 SLC30A9Q6PML9 568 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 NAGSQ8N159 534 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 KIAA1143Q96AT1 154 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 NUS1Q96E22 293 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 CELF6Q96J87 481 aaKnown RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 COQ10AQ96MF6 247 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 TEFMQ96QE5 360 aaKnown RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 CINPQ9BW66 212 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 SUDS3Q9H7L9 328 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 ZNF71Q9NQZ8 489 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-221ENST00000556571 KCNK4Q9NYG8 393 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 PILRAQ9UKJ1 303 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 SUFUQ9UMX1 484 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 MAN2B2Q9Y2E5 1009 aa11.88□□□□□ -0.51
ACTN1-221ENST00000556571 A0A1W2PQ67 120 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 EFCAB7A8K855 629 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 NKX2-8O15522 239 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 MPSTP25325 297 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 MAP4P27816 1152 aaKnown RBP11.87□□□□□ -0.51
ACTN1-221ENST00000556571 SOX5P35711 763 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 GNPDA1P46926 289 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 SCNN1BP51168 640 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 RENBPP51606 427 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 AP1S1P61966 158 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 GPLD1P80108 840 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 CTBSQ01459 385 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 RFTN1Q14699 578 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-221ENST00000556571 HSP90AA4PQ58FG1 418 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 HEATR4Q86WZ0 1026 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms