RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 BPIFA1Q9NP55 256 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 EIF2B4Q9UI10 523 aaKnown RBP14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 RAB23Q9ULC3 237 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 ARL5AQ9Y689 179 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 C1SP09871 688 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 MGAT1P26572 445 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 CRADDP78560 199 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 FGL2Q14314 439 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 CDKN3Q16667 212 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 DUPD1Q68J44 220 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 LRRC8BQ6P9F7 803 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 RFLNAQ6ZTI6 216 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 Q6ZVL8 140 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 ZNF534Q76KX8 674 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 BBOF1Q8ND07 529 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 SERAC1Q96JX3 654 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 SERPINB12Q96P63 405 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 TRABDQ9H4I3 376 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 BFARQ9NZS9 450 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 C2orf81A6NN90 581 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 AP3B1O00203 1094 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 WNT9AO14904 365 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 LATO43561 262 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 CRTAMO95727 393 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 ITPKAP23677 461 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 STC1P52823 247 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 TMPRSS15P98073 1019 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 PTPRCAPQ14761 206 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 MORF4L2Q15014 288 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 TRADDQ15628 312 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 GLE1Q53GS7 698 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 WDR45BQ5MNZ6 344 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 ALS2CLQ60I27 953 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 HIBCHQ6NVY1 386 aaPredicted RBP14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 CASC4Q6P4E1 433 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 HOOK3Q86VS8 718 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 MCUQ8NE86 351 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 BRSK1Q8TDC3 778 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 EID2BQ96D98 161 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 NUS1Q96E22 293 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 C1QTNF7Q9BXJ2 289 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 C1QTNF2Q9BXJ5 285 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 IRF2BPLQ9H1B7 796 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 EBF2Q9HAK2 575 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 EPB41L5Q9HCM4 733 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 XAB2Q9HCS7 855 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 AASDHPPTQ9NRN7 309 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 PKD2L2Q9NZM6 624 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 DMGDHQ9UI17 866 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 CA5BQ9Y2D0 317 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 PKP3Q9Y446 797 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 KCTD3Q9Y597 815 aa14.04□□□□□ -0.16
VIPAS39-208ENST00000556412 A0A1W2PPC4 97 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 PSMD11O00231 422 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 NDC80O14777 642 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 RAD51BO15315 384 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 STX7O15400 261 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 SLU7O95391 586 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 PCCBP05166 539 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 CD27P26842 260 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 AKT2P31751 481 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 PLTPP55058 493 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 CREB5Q02930 508 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 TAF1AQ15573 450 aaPredicted RBP14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 CYP2U1Q7Z449 544 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 TMC3Q7Z5M5 1100 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 CAND1Q86VP6 1230 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 TTC30BQ8N4P2 665 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 PPHLN1Q8NEY8 458 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 PIGKQ92643 395 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 ZC3H10Q96K80 434 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 COQ10AQ96MF6 247 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 PWWP2AQ96N64 755 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 WHRNQ9P202 907 aa14.03□□□□□ -0.16
VIPAS39-208ENST00000556412 GM2AP17900 193 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 LPOP22079 712 aaPredicted RBP14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 HNRNPA2B1P22626 353 aaKnown RBP14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 HMGCLP35914 325 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 CLDN2P57739 230 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 LRRC14Q15048 493 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 SPDYCQ5MJ68 293 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 ZCCHC9Q8N567 271 aaKnown RBP14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 OR4K2Q8NGD2 314 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 IFT81Q8WYA0 676 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 SCAMP4Q969E2 229 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 DTD2Q96FN9 168 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 SLC6A18Q96N87 628 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 IL22Q9GZX6 179 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 EPC1Q9H2F5 836 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 SYBUQ9NX95 663 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 GRHL1Q9NZI5 618 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 SAMD15Q9P1V8 674 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 SMG5Q9UPR3 1016 aaKnown RBP14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 DMTF1Q9Y222 760 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 MAD1L1Q9Y6D9 718 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 SLCO1B1Q9Y6L6 691 aa14.02□□□□□ -0.16
VIPAS39-208ENST00000556412 HEATR9A2RTY3 570 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 PRAMEF26H0Y7S4 382 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 CCL22O00626 93 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms