RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 FANCFQ9NPI8 374 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 IFT80Q9P2H3 777 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 SNX7Q9UNH6 387 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 SCAF8Q9UPN6 1271 aaKnown RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 GTPBP1O00178 669 aaKnown RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 IRF6O14896 467 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 FARP2O94887 1054 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 ALOX5P09917 674 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 BUD31P41223 144 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 RPL5P46777 297 aaKnown RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 GNPDA1P46926 289 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 GRIA4P48058 902 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 CHN2P52757 468 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 RPTNQ6XPR3 784 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 C3orf67Q6ZVT6 689 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 OR7A2PQ8NGA2 310 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 ZBTB45Q96K62 511 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 C12orf42Q96LP6 360 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 CORO1BQ9BR76 489 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 MIOSQ9NXC5 875 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 ADGRE2Q9UHX3 823 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 USP20Q9Y2K6 914 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 PLIN4Q96Q06 1357 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 RFXANKO14593 260 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 POP4O95707 220 aaKnown RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 CALCAP01258 141 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 PROCP04070 461 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 CRHR1P34998 444 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 CLK2P49760 499 aaKnown RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 B3GNT6Q6ZMB0 384 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 DENND1AQ8TEH3 1009 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 VPS35Q96QK1 796 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 FHDC1Q9C0D6 1143 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 SLC25A51Q9H1U9 297 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 SEMA4BQ9NPR2 832 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 CHURC1-FNTBB4DL54 471 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 ENTPD5O75356 428 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 LYNP07948 512 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 NR2C1P13056 603 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 NME5P56597 212 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 PLIN5Q00G26 463 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 MTM1Q13496 603 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 GALNT3Q14435 633 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 LARS2Q15031 903 aaKnown RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 PRKD1Q15139 912 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 MAPK11Q15759 364 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 KIAA1324Q6UXG2 1013 aaKnown RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 TMPRSS11AQ6ZMR5 421 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 APTXQ7Z2E3 356 aaKnown RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 CNTD1Q8N815 330 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 BAP1Q92560 729 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 FCRL2Q96LA5 508 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 HNRNPABQ99729 332 aaKnown RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 ZFYVE1Q9HBF4 777 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 ATXN10Q9UBB4 475 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 PHF11Q9UIL8 331 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 SH3GLB1Q9Y371 365 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 HAT1O14929 419 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 IRAK2O43187 625 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 NBNO60934 754 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 SLC22A3O75751 556 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 SLC25A14O95258 325 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 C8GP07360 202 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 ADRB2P07550 413 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 IGFALSP35858 605 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 HNRNPDQ14103 355 aaKnown RBP10.73□□□□□ -0.69
ACTN1-216ENST00000556083 AZIN2Q96A70 460 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 NACC2Q96BF6 587 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 SPACA7Q96KW9 195 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 PANX1Q96RD7 426 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 IKZF3Q9UKT9 509 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 TMEM131LA2VDJ0 1609 aa10.73□□□□□ -0.69
ACTN1-216ENST00000556083 H3BNX3 289 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 MAGEB3O15480 346 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 CXCL14O95715 111 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 ALPPL2P10696 532 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 CCR4P51679 360 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 ARHGDIBP52566 201 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 PFKPQ01813 784 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 ITGA7Q13683 1181 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 DENND1CQ8IV53 801 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 TRAPPC12Q8WVT3 735 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 SLC22A18Q96BI1 424 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 AP2M1Q96CW1 435 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 C7orf26Q96N11 449 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 GAS2L1Q99501 681 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 PDGFDQ9GZP0 370 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-216ENST00000556083 PCDH18Q9HCL0 1135 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 KLHL1Q9NR64 748 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 DAPK2Q9UIK4 370 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 SSR3Q9UNL2 185 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 ASF1AQ9Y294 204 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 SQORQ9Y6N5 450 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 CILPO75339 1184 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 TULP3O75386 442 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 ESR1P03372 595 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 CMPK1P30085 196 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 GMFBP60983 142 aa10.72□□□□□ -0.69
ACTN1-216ENST00000556083 RAB2AP61019 212 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms