RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	GRK4	P32298	578 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	GRIA3	P42263	894 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	CCT8	P50990	548 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	FOLH1	Q04609	750 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	CDH17	Q12864	832 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	PRKAA1	Q13131	559 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	TUSC3	Q13454	348 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	NAPRT	Q6XQN6	538 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	C16orf59	Q7L2K0	433 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	ADGRG6	Q86SQ4	1221 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	CENPL	Q8N0S6	344 aa	Predicted RBP	12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	PARVB	Q9HBI1	364 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	TRPM5	Q9NZQ8	1165 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	MARCH2	Q9P0N8	246 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	STK39	Q9UEW8	545 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	TRHDE	Q9UKU6	1024 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	CDH9	Q9ULB4	789 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	PRKAB1	Q9Y478	270 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	KANSL1L	A0AUZ9	987 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	ZNF839	A8K0R7	811 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	TK2	O00142	265 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	ADCY6	O43306	1168 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	ZBTB14	O43829	449 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	PIRT	P0C851	137 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	PRDX6	P30041	224 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	HAL	P42357	657 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	IDH2	P48735	452 aa	Known RBP	12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	SLC11A2	P49281	568 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	ATP12A	P54707	1039 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	C21orf59	P57076	290 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	HTRA3	P83110	453 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	ZNF177	Q13360	481 aa	Predicted RBP	12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	METTL21C	Q5VZV1	264 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	FAM180A	Q6UWF9	173 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	HFE2	Q6ZVN8	426 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	DBF4B	Q8NFT6	615 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	FBXO30	Q8TB52	745 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	KCTD4	Q8WVF5	259 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	SCLY	Q96I15	445 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	TPD52L3	Q96J77	140 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	C11orf84	Q9BUA3	381 aa	Predicted RBP	12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	IL22	Q9GZX6	179 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	DOLK	Q9UPQ8	538 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	RLF	Q13129	1914 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	SYNCRIP	O60506	623 aa	Known RBP	12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	CYP7B1	O75881	506 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	TPP2	P29144	1249 aa	Predicted RBP	12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	XIAP	P98170	497 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	DLG1	Q12959	904 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	DUSP4	Q13115	394 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	PLD1	Q13393	1074 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	GRM3	Q14832	879 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	PAFAH1B3	Q15102	231 aa	Known RBP	12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	METTL6	Q8TCB7	284 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	RCN3	Q96D15	328 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	LSM7	Q9UK45	103 aa	Known RBP	12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	GIT1	Q9Y2X7	761 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	USP3	Q9Y6I4	520 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	SI	P14410	1827 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	SSC5D	A1L4H1	1573 aa		12.31	□□□□□ -0.44
TMPO-212	ENST00000556029	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.3	□□□□□ -0.44	1e-15	■■■■■ 82.7
TMPO-212	ENST00000556029	MYADML2	A6NDP7	307 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	YJEFN3	A6XGL0	299 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	FAM72C	H0Y354	149 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	TNFRSF21	O75509	655 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	HSPA13	P48723	471 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	CHN2	P52757	468 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	TCEA2	Q15560	299 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	LSM12	Q3MHD2	195 aa	Known RBP	12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	PPM1L	Q5SGD2	360 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	FAM72A	Q5TYM5	149 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	LIPM	Q5VYY2	423 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	FAM72D	Q6L9T8	149 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	FAM72B	Q86X60	149 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	LINC01465	Q8N7H1	131 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	ARL10	Q8N8L6	244 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	SCAMP5	Q8TAC9	235 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	EXOC2	Q96KP1	924 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	HNRNPAB	Q99729	332 aa	Known RBP	12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	PTPN18	Q99952	460 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	KCTD14	Q9BQ13	255 aa	Predicted RBP	12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	EIF3L	Q9Y262	564 aa	Known RBP	12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	TRIM43B	A6NCK2	446 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	KRT87P	A6NCN2	255 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	F2	P00734	622 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	SLC2A3	P11169	496 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	RPL17	P18621	184 aa	Known RBP	12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	RAD23A	P54725	363 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	TIGD5	Q53EQ6	642 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	ARL13A	Q5H913	290 aa	Predicted RBP	12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	MARC1	Q5VT66	337 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	CACHD1	Q5VU97	1274 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	LINC00523	Q86TU6	105 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	RASAL3	Q86YV0	1011 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	SLC41A1	Q8IVJ1	513 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	LGI2	Q8N0V4	545 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	PQLC1	Q8N2U9	271 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	DHRSX	Q8N5I4	330 aa		12.3	□□□□□ -0.44
TMPO-212	ENST00000556029	NPY6R	Q99463	290 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms