RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 NUP93Q8N1F7 819 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 ATP6V0D2Q8N8Y2 350 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 MFSD2AQ8NA29 543 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 OR6P1Q8NGX9 317 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 ANKRD49Q8WVL7 239 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 LZICQ8WZA0 190 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 PAAF1Q9BRP4 392 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 UNKQ9C0B0 810 aaKnown RBP16.19■□□□□ 0.18
TUBB3-209ENST00000555609 FBXO44Q9H4M3 255 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 ALG9Q9H6U8 611 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 SP110Q9HB58 689 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 TNFRSF12AQ9NP84 129 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 TMEM45AQ9NWC5 275 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 CNOT6Q9ULM6 557 aaKnown RBP16.19■□□□□ 0.18
TUBB3-209ENST00000555609 SLC8A2Q9UPR5 921 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 RNF11Q9Y3C5 154 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 AK5Q9Y6K8 562 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 TYW5A2RUC4 315 aaKnown RBP16.18■□□□□ 0.18
TUBB3-209ENST00000555609 UBFD1O14562 309 aaKnown RBP16.18■□□□□ 0.18
TUBB3-209ENST00000555609 MSI1O43347 362 aaKnown RBP16.18■□□□□ 0.18
TUBB3-209ENST00000555609 IGHA2P01877 340 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 CHRNA1P02708 482 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 MMP2P08253 660 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 ATP6V1B1P15313 513 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 CD1DP15813 335 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 PBX3P40426 434 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 IL10RBQ08334 325 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 ITKQ08881 620 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 GPR158Q5T848 1215 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 PIK3R6Q5UE93 754 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 ZNF280DQ6N043 979 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 ZBTB49Q6ZSB9 765 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 EFL1Q7Z2Z2 1120 aaKnown RBP16.18■□□□□ 0.18
TUBB3-209ENST00000555609 PTAR1Q7Z6K3 402 aaPredicted RBP16.18■□□□□ 0.18
TUBB3-209ENST00000555609 MIER2Q8N344 545 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 HDAC10Q969S8 669 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 FUBP3Q96I24 572 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■□□□ 14.4
TUBB3-209ENST00000555609 FEM1CQ96JP0 617 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 SLC45A3Q96JT2 553 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 RGS18Q9NS28 235 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 MPP6Q9NZW5 540 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 SNX13Q9Y5W8 968 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 A0A0U1RQF3 1178 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 A0A1W2PQH9 124 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 CCDC160A6NGH7 325 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 INPPL1O15357 1258 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 DUSP11O75319 330 aaKnown RBP16.18■□□□□ 0.18
TUBB3-209ENST00000555609 BMP10O95393 424 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 GLP2RO95838 553 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 FGF1P05230 155 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 AKR1A1P14550 325 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 IL10P22301 178 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 SLC7A2P52569 658 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 CDKN2DP55273 166 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 DSC3Q14574 896 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 PARP15Q460N3 678 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 SIRPB2Q5JXA9 342 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 LCN8Q6JVE9 175 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 KRT80Q6KB66 452 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 TMEM207Q6UWW9 146 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 CYHR1Q6ZMK1 362 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 KDELC2Q7Z4H8 507 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 SPATA19Q7Z5L4 167 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 SERINC5Q86VE9 423 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 CAMK1DQ8IU85 385 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 FUNDC1Q8IVP5 155 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 DCP1BQ8IZD4 617 aaKnown RBP16.18■□□□□ 0.18
TUBB3-209ENST00000555609 TRIML2Q8N7C3 387 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 HMCESQ96FZ2 354 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 C8orf48Q96LL4 319 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 CCT7Q99832 543 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 PTPN18Q99952 460 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 TMEM79Q9BSE2 394 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 AKTIPQ9H8T0 292 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 PFDN4Q9NQP4 134 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 CIDEBQ9UHD4 219 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 PCDHGB4Q9UN71 923 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 PCDHGB5Q9Y5G0 923 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 CEPT1Q9Y6K0 416 aa16.18■□□□□ 0.18
TUBB3-209ENST00000555609 TRPM7Q96QT4 1865 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 A0A0J9YYE9 177 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 KANSL1LA0AUZ9 987 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 MOXD2PA6NHM9 499 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 AZIN1O14977 448 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 HTRA2O43464 458 aaPredicted RBP16.17■□□□□ 0.18
TUBB3-209ENST00000555609 LDB2O43679 373 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 FCGR1AP12314 374 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 ATXN3P54252 364 aaPredicted RBP16.17■□□□□ 0.18
TUBB3-209ENST00000555609 TBX4P57082 545 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 YBEYP58557 167 aaPredicted RBP16.17■□□□□ 0.18
TUBB3-209ENST00000555609 GK3PQ14409 553 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 KCTD21Q4G0X4 260 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 KANK2Q63ZY3 851 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 ARRDC2Q8TBH0 407 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 RMND5BQ96G75 393 aaPredicted RBP16.17■□□□□ 0.18
TUBB3-209ENST00000555609 TMEM209Q96SK2 561 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 RETREG1Q9H6L5 497 aa16.17■□□□□ 0.18
TUBB3-209ENST00000555609 AGO3Q9H9G7 860 aaKnown RBP16.17■□□□□ 0.18
TUBB3-209ENST00000555609 CLK4Q9HAZ1 481 aaKnown RBP16.17■□□□□ 0.18
TUBB3-209ENST00000555609 NMUR1Q9HB89 426 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms