RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PLCD4Q9BRC7 762 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 POLR1EQ9GZS1 481 aaKnown RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 MIR1-1HGQ9H1L0 117 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 DUSP15Q9H1R2 295 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 KCNH6Q9H252 994 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 C6orf106Q9H6K1 298 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 ATP13A3Q9H7F0 1226 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 KLHL8Q9P2G9 620 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 SLC24A2Q9UI40 661 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 SCML1Q9UN30 329 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 SMG5Q9UPR3 1016 aaKnown RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 ITM2BQ9Y287 266 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 LRRK1Q38SD2 2015 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 DNAH14Q0VDD8 3507 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 ADAMTS9Q9P2N4 1935 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CXorf51AA0A1B0GTR3 108 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 TMEM120BA0PK00 339 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 MEI4A8MW99 385 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 LILRB5O75023 590 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 SEMA4FO95754 770 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ITGB7P26010 798 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 PTPN3P26045 913 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 MAOBP27338 520 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 SERPINA4P29622 427 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 MAT2AP31153 395 aaKnown RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 STIP1P31948 543 aaKnown RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CNR2P34972 360 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CD86P42081 329 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 PTGER3P43115 390 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 LIG3P49916 1009 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 NEK3P51956 506 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ADPRHP54922 357 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CREB5Q02930 508 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 NIPAL4Q0D2K0 466 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 SFSWAPQ12872 951 aaKnown RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 PCSK7Q16549 785 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 PLK5Q496M5 336 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ZNF805Q5CZA5 627 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 RNF187Q5TA31 235 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 AGBL4Q5VU57 503 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 SLC36A4Q6YBV0 504 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ERN2Q76MJ5 926 aaKnown RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 PID1Q7Z2X4 250 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CDKL3Q8IVW4 592 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 TEX26Q8N6G2 289 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CNTD1Q8N815 330 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 DYDC1Q8WWB3 177 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 HTR3CQ8WXA8 447 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 NUDCD1Q96RS6 583 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 MGME1Q9BQP7 344 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 SUV39H2Q9H5I1 410 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 SAYSD1Q9NPB0 183 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 HAUS2Q9NVX0 235 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 NKIRAS1Q9NYS0 192 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 WSB2Q9NYS7 404 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 UBP1Q9NZI7 540 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 GGT7Q9UJ14 662 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 FAM186AA6NE01 2351 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 EXOC1LA0A1B0GW35 172 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 HACD1B0YJ81 288 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ANKRD65E5RJM6 399 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 E7ESA3 106 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 RHOBTB1O94844 696 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 GSTA1P08263 222 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ADRB3P13945 408 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 BRAFP15056 766 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ITPKAP23677 461 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 PHBP35232 272 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ABL2P42684 1182 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ARL4CP56559 192 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 AP1S1P61966 158 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 NSUN2Q08J23 767 aaKnown RBP eCLIP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 TRAF2Q12933 501 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 HIF1AQ16665 826 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 PIP5KL1Q5T9C9 394 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 USP30Q70CQ3 517 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ZSWIM9Q86XI8 627 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 SLC41A1Q8IVJ1 513 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 LRRC34Q8IZ02 419 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CNPY4Q8N129 248 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 ZNF567Q8N184 647 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 FAM71DQ8N9W8 422 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 GLIS1Q8NBF1 620 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 SPATA22Q8NHS9 363 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CCDC110Q8TBZ0 833 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CKAP2Q8WWK9 683 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CCT6BQ92526 530 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 PIGKQ92643 395 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 C9orf72Q96LT7 481 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 IL12RB2Q99665 862 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 MYOCQ99972 504 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 FERMT1Q9BQL6 677 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 TMEM121Q9BTD3 319 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 WRAP53Q9BUR4 548 aaKnown RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 OSBPL1AQ9BXW6 950 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 FRMD8Q9BZ67 464 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 BRD8Q9H0E9 1235 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 SMOC1Q9H4F8 434 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 SGK2Q9HBY8 427 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms