RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ARHGEF17Q96PE2 2063 aaPredicted RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 LRRD1A4D1F6 860 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 FAM149AA5PLN7 773 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 CACNB4O00305 520 aaPredicted RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 TNFRSF10CO14798 259 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 FZD6O60353 706 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 HEXIM1O94992 359 aaKnown RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 PCCBP05166 539 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 ALPIP09923 528 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 CYP2A6P11509 494 aaPredicted RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 GM2AP17900 193 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 CA4P22748 312 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 KELP23276 732 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 TEAD1P28347 426 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 RPIAP49247 311 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 MAXP61244 160 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 GBE1Q04446 702 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 ELOCQ15369 112 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 CNGA3Q16281 694 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 ALG11Q2TAA5 492 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 PRRT3Q5FWE3 981 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 ZFYVE27Q5T4F4 411 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 FAXCQ5TGI0 409 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 SLC9A4Q6AI14 798 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 RAVER1Q8IY67 606 aaKnown RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 RBFAQ8N0V3 343 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 NDUFAF2Q8N183 169 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 CBARPQ8N350 705 aaPredicted RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 TC2NQ8N9U0 490 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 PDCD6IPQ8WUM4 868 aaKnown RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 RAPGEF5Q92565 580 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 ZNF830Q96NB3 372 aaPredicted RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 SEMA3CQ99985 751 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 TRIM5Q9C035 493 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 NRSN2Q9GZP1 204 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 TCEAL2Q9H3H9 227 aaPredicted RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 CAAP1Q9H8G2 361 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 NT5MQ9NPB1 228 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 DTLQ9NZJ0 730 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 KLQ9UEF7 1012 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 TSR3Q9UJK0 312 aaKnown RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 DNPEPQ9ULA0 475 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 PNMA8BQ9ULN7 279 aaPredicted RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 CLCA2Q9UQC9 943 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 OR1A2Q9Y585 309 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 DGKBQ9Y6T7 804 aa10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 URB1O60287 2271 aaKnown RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 ZFC3H1O60293 1989 aaKnown RBP10.43□□□□□ -0.74
PTCD2P1-201ENST00000554393 TTC24A2A3L6 582 aaPredicted RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 EME2A4GXA9 379 aaPredicted RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 C3orf70A6NLC5 250 aaPredicted RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 PDE2AO00408 941 aaPredicted RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 OPA1O60313 960 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 GCATO75600 419 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 LCA5LO95447 670 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 ANXA6P08133 673 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 CCNB1P14635 433 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 TSHRP16473 764 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 ZFXP17010 805 aaPredicted RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 LHCGRP22888 699 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 SRP54P61011 504 aaKnown RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 RPL26P61254 145 aaKnown RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 SEMG2Q02383 582 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 PPIDQ08752 370 aaKnown RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 TARDBPQ13148 414 aaKnown RBP eCLIP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 RTP5Q14D33 572 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 ACOX1Q15067 660 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 NR0B2Q15466 257 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 DEFB133Q30KQ1 61 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 CDCP2Q5VXM1 449 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 ENPP7Q6UWV6 458 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 MARCH9Q86YJ5 346 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 RHOT1Q8IXI2 618 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 PARP9Q8IXQ6 854 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 CCDC13Q8IYE1 715 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 CCDC170Q8IYT3 715 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 PLD5Q8N7P1 536 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 PLA2G15Q8NCC3 412 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 OR56A4Q8NGH8 313 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 TPCN2Q8NHX9 752 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 WDR48Q8TAF3 677 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 MDM1Q8TC05 714 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 IFI44Q8TCB0 444 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 PIH1D2Q8WWB5 315 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 SCG3Q8WXD2 468 aaKnown RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 NAT6Q93015 286 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 FUBP1Q96AE4 644 aaKnown RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 NUS1Q96E22 293 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 DTD2Q96FN9 168 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 RBM15Q96T37 977 aaKnown RBP eCLIP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 BRD8Q9H0E9 1235 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 WDR26Q9H7D7 661 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 LUC7LQ9NQ29 371 aaKnown RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 RBM22Q9NW64 420 aaKnown RBP eCLIP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 DDX56Q9NY93 547 aaKnown RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 RPL26L1Q9UNX3 145 aaKnown RBP10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 RAI2Q9Y5P3 530 aa10.42□□□□□ -0.74
PTCD2P1-201ENST00000554393 ADAMTS20P59510 1910 aa10.41□□□□□ -0.74
PTCD2P1-201ENST00000554393 CELSR3Q9NYQ7 3312 aa10.41□□□□□ -0.74
PTCD2P1-201ENST00000554393 A0A0A6YYK5 440 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms