RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 NCKAP1Q9Y2A7 1128 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 SPO11Q9Y5K1 396 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 ARL5AQ9Y689 179 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 MYOFQ9NZM1 2061 aa10.48□□□□□ -0.73
TMEM55B-205ENST00000554028 CDH23Q9H251 3354 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 ZCWPW2A0A1B0GU75 182 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 KANSL1LA0AUZ9 987 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 FAM159BA6NKW6 160 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 SMIM23A6NLE4 172 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 FAM170BA6NMN3 283 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 A8MX80 341 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 RGS16O15492 202 aaPredicted RBP10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 BUD23O43709 281 aaKnown RBP10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 CDH16O75309 829 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 KRT38O76015 456 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 SHBGP04278 402 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 PRKCGP05129 697 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 ERVK-10P10266 1014 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 ACADMP11310 421 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 BMP1P13497 986 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 PPARGP37231 505 aaPredicted RBP10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 SERPINB9P50453 376 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 STARD6P59095 220 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 TMPRSS15P98073 1019 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 SATB1Q01826 763 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 ZBTB16Q05516 673 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF844Q08AG5 666 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 KBTBD12Q3ZCT8 623 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 TTC31Q49AM3 519 aaPredicted RBP10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 HSP90AA5PQ58FG0 334 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 MRNIPQ6NTE8 343 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 NEPROQ6NW34 567 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 AFTPHQ6ULP2 937 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 CRTC1Q6UUV9 634 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 PARS2Q7L3T8 475 aaKnown RBP10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 LYSMD3Q7Z3D4 306 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 SLC26A11Q86WA9 606 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 ZSWIM9Q86XI8 627 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 SIX5Q8N196 739 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 HDAC10Q969S8 669 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 MRRFQ96E11 262 aaKnown RBP10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 CDKN2AIPNLQ96HQ2 116 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 DNAJC1Q96KC8 554 aaKnown RBP10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF778Q96MU6 729 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 TRIM56Q9BRZ2 755 aaKnown RBP10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 PCDH12Q9NPG4 1184 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 MED4Q9NPJ6 270 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 PKD2L2Q9NZM6 624 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 B4GALT6Q9UBX8 382 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 APPL1Q9UKG1 709 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 SARDHQ9UL12 918 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 MMP17Q9ULZ9 603 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 NFS1Q9Y697 457 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 SLC30A1Q9Y6M5 507 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 A0A0C4DFX4 3053 aa10.47□□□□□ -0.73
TMEM55B-205ENST00000554028 IQANK1A0A1B0GTG1 560 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 RGSL1A5PLK6 1076 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 NPIPB15A6NHN6 443 aaPredicted RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 GOLGA8KD6RF30 607 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 AURKAO14965 403 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 SASH3O75995 380 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 KRT37O76014 449 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 CLDN7O95471 211 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 CHRNB1P11230 501 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 ADRB3P13945 408 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 CNTFP26441 200 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 PMLP29590 882 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 SLCO1A2P46721 670 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 DGKEP52429 567 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF140P52738 457 aaPredicted RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 RPS14P62263 151 aaKnown RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 ACVR1Q04771 509 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 RASA2Q15283 850 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 FASTKD1Q53R41 847 aaKnown RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 AARS2Q5JTZ9 985 aaKnown RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 GRTP1Q5TC63 336 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 LRRC66Q68CR7 880 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 TRMT10BQ6PF06 316 aaKnown RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 KIAA0408Q6ZU52 694 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 MARK2Q7KZI7 788 aaKnown RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 DPPA4Q7L190 304 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 TDRPQ86YL5 185 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 TMPRSS6Q8IU80 811 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 RAVER1Q8IY67 606 aaKnown RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 CBARPQ8N350 705 aaPredicted RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 TTC30BQ8N4P2 665 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 HDDC3Q8N4P3 179 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 OR13C4Q8NGS5 318 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 OR4L1Q8NH43 312 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 CXorf40AQ8TE69 158 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 SLC44A1Q8WWI5 657 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 ARRDC3Q96B67 414 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 SIPA1Q96FS4 1042 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 TBATAQ96M53 351 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 PAFAH2Q99487 392 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 CPNE1Q99829 537 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 CDH19Q9H159 772 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 MFSD1Q9H3U5 465 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms