RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 PAFAH1B3Q15102 231 aaKnown RBP11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SLC18A3Q16572 532 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ASTE1Q2TB18 679 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 RALGPS1Q5JS13 557 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 NCBP2-AS2Q69YL0 99 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SPECC1LQ69YQ0 1117 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 H2AFVQ71UI9 128 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 TAF8Q7Z7C8 310 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 TSPAN33Q86UF1 283 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 LRRC49Q8IUZ0 686 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SFTPA2Q8IWL1 248 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CBARPQ8N350 705 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SDR16C5Q8N3Y7 309 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 OR8K1Q8NGG5 319 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CTNNBL1Q8WYA6 563 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CCDC74AQ96AQ1 378 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ZNF578Q96N58 590 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 DNAJC7Q99615 494 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 TMEM168Q9H0V1 697 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 WDR26Q9H7D7 661 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CYP4F12Q9HCS2 524 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SATB2Q9UPW6 733 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ENTPD2Q9Y5L3 495 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 BOD1L1Q8NFC6 3051 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 TNFRSF10CO14798 259 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 CBFA2T2O43439 604 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 TCEA3O75764 348 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 DXOO77932 396 aaKnown RBP11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 PDHA1P08559 390 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 KELP23276 732 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 PDX1P52945 283 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 DSC2Q02487 901 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 GBE1Q04446 702 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 PDK2Q15119 407 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 SKOR2Q2VWA4 1001 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 C3orf38Q5JPI3 329 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 ARMC12Q5T9G4 340 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 RFLNAQ6ZTI6 216 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 Q6ZVL8 140 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 LSMEM2Q8N112 164 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 PQLC3Q8N755 202 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 FAM46DQ8NEK8 389 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 CCL4L1Q8NHW4 92 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 PIH1D2Q8WWB5 315 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 MAML1Q92585 1016 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 DTD2Q96FN9 168 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 SCRN2Q96FV2 425 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 NAF1Q96HR8 494 aaKnown RBP11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 HIC2Q96JB3 615 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 BBC3Q96PG8 261 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 MCCC1Q96RQ3 725 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 ZNF670Q9BS34 389 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 DEF6Q9H4E7 631 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 SUDS3Q9H7L9 328 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 ASCL3Q9NQ33 180 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 RBM22Q9NW64 420 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 MOSPD1Q9UJG1 213 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 TTLL3Q9Y4R7 772 aa11.89□□□□□ -0.51
TRAPPC6B-204ENST00000554018 ZNF462Q96JM2 2506 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 GOLGA6CA6NDK9 693 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 GOLGA6BA6NDN3 693 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 PDE2AO00408 941 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 NTN3O00634 580 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 MATN3O15232 486 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 AKR1B10O60218 316 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 FZD6O60353 706 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 FUCA1P04066 466 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 CEACAM5P06731 702 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 KRT7P08729 469 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 GOLGA6DP0CG33 693 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 MYCLP1P12525 358 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 NFKBIAP25963 317 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 PCBP4P57723 403 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 CCL7P80098 99 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 SLC10A2Q12908 348 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 ARHGEF7Q14155 803 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 SPIDRQ14159 915 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 MESDQ14696 234 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 ZFYVE27Q5T4F4 411 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 FOXR1Q6PIV2 292 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 USP45Q70EL2 814 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 HEATR4Q86WZ0 1026 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 VSTM4Q8IW00 320 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 MAP7D3Q8IWC1 876 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 SPACA3Q8IXA5 215 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 Q8N9G6 341 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 GPR156Q8NFN8 814 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 WDR48Q8TAF3 677 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 PTCD2Q8WV60 388 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 RAPGEF5Q92565 580 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 GRAMD1AQ96CP6 724 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 FAF2Q96CS3 445 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 TSGA13Q96PP4 275 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 LGMNQ99538 433 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 CHP1Q99653 195 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 TEX101Q9BY14 249 aa11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 POLR1EQ9GZS1 481 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-204ENST00000554018 PRORYQ9H606 182 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms