RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 SCN4BQ8IWT1 228 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 RYBPQ8N488 228 aaPredicted RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 LZTR1Q8N653 840 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 B4GALNT2Q8NHY0 566 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 FAM45AQ8TCE6 357 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 DIS3LQ8TF46 1054 aaKnown RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 RPL10LQ96L21 214 aaKnown RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 UHRF1Q96T88 793 aaPredicted RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 AP5M1Q9H0R1 490 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 TUBB1Q9H4B7 451 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 AKTIPQ9H8T0 292 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 LIN28AQ9H9Z2 209 aaKnown RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 ARNT2Q9HBZ2 717 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 PRDM5Q9NQX1 630 aaPredicted RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 RGS18Q9NS28 235 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 MAP10Q9P2G4 905 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 UXTQ9UBK9 157 aaPredicted RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 CROTQ9UKG9 612 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 IKZF3Q9UKT9 509 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 DMTF1Q9Y222 760 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 GIT1Q9Y2X7 761 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 VWA7Q9Y334 891 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 DNAJC15Q9Y5T4 150 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 CEPT1Q9Y6K0 416 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 VWA8A3KMH1 1905 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 ARHGAP10A1A4S6 786 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 FAM149AA5PLN7 773 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 SAC3D1A6NKF1 404 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 M0QZQ0 153 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 DLGAP1O14490 977 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 HTRA2O43464 458 aaPredicted RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 LDB2O43679 373 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 CDK14O94921 469 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 GNAO1P09471 354 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 CD1DP15813 335 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 OXTRP30559 389 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC7A1P30825 629 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 RPL9P32969 192 aaKnown RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 MGAT3Q09327 533 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 GALNT3Q14435 633 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 MAPRE2Q15555 327 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 FRMPD3Q5JV73 1810 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 TAF2Q6P1X5 1199 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 METTL23Q86XA0 190 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 PHYKPLQ8IUZ5 450 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 FIBCD1Q8N539 461 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 TTC9BQ8N6N2 239 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 PTGR2Q8N8N7 351 aaPredicted RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 KLHDC9Q8NEP7 349 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 TRPV1Q8NER1 839 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 ARRDC2Q8TBH0 407 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 GPR152Q8TDT2 470 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 CANT1Q8WVQ1 401 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 EZH1Q92800 747 aaPredicted RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 IGSF8Q969P0 613 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 L3HYPDHQ96EM0 354 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 HIC2Q96JB3 615 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 FAR2Q96K12 515 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 TBATAQ96M53 351 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 TMEM79Q9BSE2 394 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC25A23Q9BV35 468 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 KATNAL1Q9BW62 490 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 MFSD1Q9H3U5 465 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 EML4Q9HC35 981 aaKnown RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 ABI2Q9NYB9 513 aaPredicted RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 NDUFA13Q9P0J0 144 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 EGFL7Q9UHF1 273 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 CNOT11Q9UKZ1 510 aaKnown RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 BTRCQ9Y297 605 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 ACTL7AQ9Y615 435 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 ARL5AQ9Y689 179 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 ZFC3H1O60293 1989 aaKnown RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 GREB1Q4ZG55 1949 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 A0A0J9YYE9 177 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 M0QZ92 97 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 PDLIM1O00151 329 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 HNRNPRO43390 633 aaKnown RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 TPST1O60507 370 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 GPC4O75487 556 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 TBX18O95935 607 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 RBP1P09455 135 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 MTHFD2P13995 350 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 CDH2P19022 906 aaPredicted RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 FDXRP22570 491 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 NDST2P52849 883 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 MLLT6P55198 1093 aaPredicted RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 HERVK_113P63132 956 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 ECT2LQ008S8 904 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 DDR2Q16832 855 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 KIF19Q2TAC6 998 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 VPS26BQ4G0F5 336 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC39A12Q504Y0 691 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 MS4A13Q5J8X5 152 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SPRYD7Q5W111 196 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 BEND5Q7L4P6 421 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SPATA2LQ8IUW3 424 aaPredicted RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 TSPAN14Q8NG11 270 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 OR13C4Q8NGS5 318 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 TWIST2Q8WVJ9 160 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 TOP1MTQ969P6 601 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms