RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ALCAMQ13740 583 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 INAVAQ3KP66 663 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 OR52K2Q8NGK3 314 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 OR6B3Q8NGW1 331 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 FBXO27Q8NI29 283 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 HM13Q8TCT9 377 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 IFT43Q96FT9 208 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 SH2D3AQ9BRG2 576 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 C9orf16Q9BUW7 83 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 KCNK4Q9NYG8 393 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 RAPGEFL1Q9UHV5 662 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 PRELID3BQ9Y3B1 194 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 AP1M2Q9Y6Q5 423 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 PZPP20742 1482 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 DCAF8L1A6NGE4 600 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 DISC1C4P0D8 188 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 FAM155BO75949 473 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 ZBTB7AO95365 584 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 MAPK9P45984 424 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 MARCKSL1P49006 195 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 HARS2P49590 506 aaKnown RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 IFRD2Q12894 506 aaPredicted RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 P2RY8Q86VZ1 359 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 TSNAXQ99598 290 aaKnown RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 TASP1Q9H6P5 420 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 SDHAF2Q9NX18 166 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 ACSL5Q9ULC5 683 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 CRTAPO75718 401 aaPredicted RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 SMIM18P0DKX4 95 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 SLC15A1P46059 708 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 FAM76BQ5HYJ3 339 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 BRINP3Q76B58 766 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 OR4D10Q8NGI6 311 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 OR4Q3Q8NH05 313 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 MAFIPQ8WZ33 124 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 FEM1CQ96JP0 617 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 ERVK13-1Q9NX77 482 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 CCDC167Q9P0B6 97 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 CLTBP09497 229 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 SSTR2P30874 369 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 NKX1-1Q15270 411 aaPredicted RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 TPRG1LQ5T0D9 272 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 OR8K5Q8NH50 307 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 FAM162AQ96A26 154 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 SAMD11Q96NU1 681 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 SOX17Q9H6I2 414 aaPredicted RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 PLAGL2Q9UPG8 496 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 PCDHGA9Q9Y5G4 932 aaKnown RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 NUMBLQ9Y6R0 609 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 GAPVD1Q14C86 1478 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 MED24O75448 989 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 TGM6O95932 706 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 T-ENOLP0DO92 83 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 CKMT1AP12532 417 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 RAB33AQ14088 237 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 CYP51A1Q16850 503 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 PSRC1Q6PGN9 363 aaPredicted RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 CHSY1Q86X52 802 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 PRSS58Q8IYP2 241 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 RCN3Q96D15 328 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 RNF145Q96MT1 663 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNF577Q9BSK1 485 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 TFCP2L1Q9NZI6 479 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 PHF11Q9UIL8 331 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 GGA1Q9UJY5 639 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 ENTPD4Q9Y227 616 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 LINC00587B1AMM8 73 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 PLA2G6O60733 806 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 IL6P05231 212 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 BMP3P12645 472 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 IFNAR1P17181 557 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 SLC1A6P48664 564 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 TOB1P50616 345 aaPredicted RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 HADHBP55084 474 aaKnown RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 ADAM15Q13444 863 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 GRIN2CQ14957 1233 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 UGT8Q16880 541 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 KCNT2Q6UVM3 1135 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 THAP3Q8WTV1 239 aaPredicted RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 MEGF10Q96KG7 1140 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 CCDC106Q9BWC9 280 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 ACAD9Q9H845 621 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 RAB6BQ9NRW1 208 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNF275Q9NSD4 429 aaPredicted RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 EXD2Q9NVH0 621 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 NKIRAS2Q9NYR9 191 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 NAGPAQ9UK23 515 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 NOSIPQ9Y314 301 aaKnown RBP9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 PLB1Q6P1J6 1458 aa9.01□□□□□ -0.97
GTF2A1-203ENST00000553612 H3BNH8 94 aa9□□□□□ -0.97
GTF2A1-203ENST00000553612 PLOD2O00469 737 aa9□□□□□ -0.97
GTF2A1-203ENST00000553612 NCAM1P13591 858 aa9□□□□□ -0.97
GTF2A1-203ENST00000553612 OMPP47874 163 aa9□□□□□ -0.97
GTF2A1-203ENST00000553612 WDR4P57081 412 aaKnown RBP9□□□□□ -0.97
GTF2A1-203ENST00000553612 MAB21L1Q13394 359 aa9□□□□□ -0.97
GTF2A1-203ENST00000553612 MAPKAPK3Q16644 382 aa9□□□□□ -0.97
GTF2A1-203ENST00000553612 SPATA2LQ8IUW3 424 aaPredicted RBP9□□□□□ -0.97
GTF2A1-203ENST00000553612 FBXL6Q8N531 539 aa9□□□□□ -0.97
GTF2A1-203ENST00000553612 PNMA1Q8ND90 353 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms