RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CCNB1P14635 433 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 ITPKBP27987 946 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 PDX1P52945 283 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 ILKQ13418 452 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 NR0B2Q15466 257 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 DOK6Q6PKX4 331 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 SARM1Q6SZW1 724 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 HEATR4Q86WZ0 1026 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 CBARPQ8N350 705 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-206ENST00000553529 CCNYQ8ND76 341 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 LPCAT1Q8NF37 534 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 MAPK15Q8TD08 544 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 NSMCE1Q8WV22 266 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 SCAMP4Q969E2 229 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 DTD2Q96FN9 168 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 DUSP23Q9BVJ7 150 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 TDRD1Q9BXT4 1180 aaKnown RBP18.23■□□□□ 0.51
SHMT2-206ENST00000553529 SYNDIG1Q9H7V2 258 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 CYP4F12Q9HCS2 524 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 PHTF1Q9UMS5 762 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 AK5Q9Y6K8 562 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 RP1P56715 2156 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 A0A0U1RQJ8 604 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 EME2A4GXA9 379 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-206ENST00000553529 SOWAHDA6NJG2 315 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 CTSEP14091 401 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 PECAM1P16284 738 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-206ENST00000553529 HSPA9P38646 679 aaKnown RBP18.22■□□□□ 0.51
SHMT2-206ENST00000553529 CD86P42081 329 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 PEX5P50542 639 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 KIAA1024LP59773 190 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 IFI16Q16666 785 aaKnown RBP18.22■□□□□ 0.51
SHMT2-206ENST00000553529 SLC9A4Q6AI14 798 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 ESRP1Q6NXG1 681 aaKnown RBP18.22■□□□□ 0.51
SHMT2-206ENST00000553529 KDELC2Q7Z4H8 507 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 TECPR1Q7Z6L1 1165 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 RFX6Q8HWS3 928 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 CCDC13Q8IYE1 715 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 OR56A4Q8NGH8 313 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 BTN2A2Q8WVV5 523 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 MCCC1Q96RQ3 725 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-206ENST00000553529 CCDC3Q9BQI4 270 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 POLR1EQ9GZS1 481 aaKnown RBP18.22■□□□□ 0.51
SHMT2-206ENST00000553529 SEPT10Q9P0V9 454 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 LHX6Q9UPM6 363 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 TMEM98Q9Y2Y6 226 aa18.22■□□□□ 0.51
SHMT2-206ENST00000553529 PKD1L2Q7Z442 2459 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 CLDN7O95471 211 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 TPM1P09493 284 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 PIRTP0C851 137 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 CCNCP24863 283 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 AK4P27144 223 aaPredicted RBP18.21■□□□□ 0.51
SHMT2-206ENST00000553529 TRIM23P36406 574 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 ZNF75DP51815 510 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 POLR2LP62875 67 aaKnown RBP18.21■□□□□ 0.51
SHMT2-206ENST00000553529 SKOR1P84550 965 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 PTSQ03393 145 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 GALNT3Q14435 633 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 TSR1Q2NL82 804 aaKnown RBP18.21■□□□□ 0.51
SHMT2-206ENST00000553529 ALG1LQ6GMV1 187 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 B3GNT8Q7Z7M8 397 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 CNGA4Q8IV77 575 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 BBS5Q8N3I7 341 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 SPOCK2Q92563 424 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 CCDC74AQ96AQ1 378 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 HAUS1Q96CS2 278 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 HDAC11Q96DB2 347 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 NXPE2Q96DL1 559 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 SCRN2Q96FV2 425 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 ATXN7L3BQ96GX2 97 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 TSGA13Q96PP4 275 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 HERPUD2Q9BSE4 406 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 ABCG8Q9H221 673 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 WDR26Q9H7D7 661 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 C10orf88Q9H8K7 445 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 PADI4Q9UM07 663 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 GPR34Q9UPC5 381 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 REXO2Q9Y3B8 237 aaKnown RBP18.21■□□□□ 0.51
SHMT2-206ENST00000553529 APC2O95996 2303 aa18.21■□□□□ 0.51
SHMT2-206ENST00000553529 A0A0J9YYE9 177 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 PRSS38A1L453 326 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 CFAP69A5D8W1 941 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 B4DGG1 531 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 CACNB4O00305 520 aaPredicted RBP18.2■□□□□ 0.5
SHMT2-206ENST00000553529 TPP1O14773 563 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 APOL1O14791 398 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 USP12O75317 370 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 TRBC1P01850 177 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 CEACAM5P06731 702 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 HTR1BP28222 390 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 MAGEA1P43355 309 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 CDK3Q00526 305 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 PPIDQ08752 370 aaKnown RBP18.2■□□□□ 0.5
SHMT2-206ENST00000553529 AP1B1Q10567 949 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 KAZNQ674X7 775 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 RAET1GQ6H3X3 334 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 NRROSQ86YC3 692 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 TPCN2Q8NHX9 752 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 PATE1Q8WXA2 126 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 KRT35Q92764 455 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms