RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PCGF3Q3KNV8 242 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 DCAF6Q58WW2 860 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 MANEAQ5SRI9 462 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 DLK2Q6UY11 383 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 PQLC2Q6ZP29 291 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 ZNF367Q7RTV3 350 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 TAGAPQ8N103 731 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 SCML4Q8N228 414 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 TMEM199Q8N511 208 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 SCCPDHQ8NBX0 429 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 HJURPQ8NCD3 748 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-210ENST00000553455 SLC25A28Q96A46 364 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 RRNAD1Q96FB5 475 aaKnown RBP5.28□□□□□ -1.56
SYNE2-210ENST00000553455 ZNF570Q96NI8 536 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 IFIH1Q9BYX4 1025 aaKnown RBP5.28□□□□□ -1.56
SYNE2-210ENST00000553455 KCNN2Q9H2S1 579 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 PLK3Q9H4B4 646 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 SLC28A3Q9HAS3 691 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 PDE7BQ9NP56 450 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 KRCC1Q9NPI7 259 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-210ENST00000553455 TMEM51Q9NW97 253 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 OGFRQ9NZT2 677 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 NENFQ9UMX5 172 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 SRPRBQ9Y5M8 271 aaKnown RBP5.28□□□□□ -1.56
SYNE2-210ENST00000553455 BECN2A8MW95 431 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 KDM4EB2RXH2 506 aaPredicted RBP5.27□□□□□ -1.57
SYNE2-210ENST00000553455 MS4A18H0YCH9 400 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 VCYO14598 125 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 TIMM23O14925 209 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 P4HA2O15460 535 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 PLOD3O60568 738 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 MTA2O94776 668 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 SOX30O94993 753 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 SELLP14151 372 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 IL11P20809 199 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 KRT20P35900 424 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 EIF2DP41214 584 aaKnown RBP5.27□□□□□ -1.57
SYNE2-210ENST00000553455 PIK3CAP42336 1068 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 CTTNQ14247 550 aaKnown RBP5.27□□□□□ -1.57
SYNE2-210ENST00000553455 GPR18Q14330 331 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 HNF4GQ14541 408 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 LRIF1Q5T3J3 769 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 CRELD2Q6UXH1 353 aaPredicted RBP5.27□□□□□ -1.57
SYNE2-210ENST00000553455 DPPA4Q7L190 304 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 MON1BQ7L1V2 547 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 RNF168Q8IYW5 571 aaPredicted RBP5.27□□□□□ -1.57
SYNE2-210ENST00000553455 NRACQ8N912 160 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 AGBL3Q8NEM8 1001 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 RPL36ALQ969Q0 106 aaKnown RBP5.27□□□□□ -1.57
SYNE2-210ENST00000553455 VCPIP1Q96JH7 1222 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 SEPT5Q99719 369 aaPredicted RBP5.27□□□□□ -1.57
SYNE2-210ENST00000553455 SLF1Q9BQI6 1058 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 CATSPERBQ9H7T0 1116 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 PLAC1Q9HBJ0 212 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 WSB2Q9NYS7 404 aaPredicted RBP5.27□□□□□ -1.57
SYNE2-210ENST00000553455 CHORDC1Q9UHD1 332 aaPredicted RBP5.27□□□□□ -1.57
SYNE2-210ENST00000553455 ERVK-11Q9UQG0 969 aa5.27□□□□□ -1.57
SYNE2-210ENST00000553455 A0A1W2PR77 199 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 C1orf226A1L170 272 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 WNT9BO14905 357 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 HS6ST1O60243 411 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 TPPPO94811 219 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 SRPRAP08240 638 aaKnown RBP5.26□□□□□ -1.57
SYNE2-210ENST00000553455 HOXB2P14652 356 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 MAOAP21397 527 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 TBXAS1P24557 533 aaPredicted RBP5.26□□□□□ -1.57
SYNE2-210ENST00000553455 PON1P27169 355 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 ACADLP28330 430 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 NNMTP40261 264 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 ABCG1P45844 678 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 SLC15A1P46059 708 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 ACSM2AQ08AH3 577 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 IKQ13123 557 aaPredicted RBP5.26□□□□□ -1.57
SYNE2-210ENST00000553455 PCLAFQ15004 111 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 PRTGQ2VWP7 1150 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 ZSCAN23Q3MJ62 389 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 PXDC1Q5TGL8 231 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 ACSM2BQ68CK6 577 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 MRPL10Q7Z7H8 261 aaKnown RBP5.26□□□□□ -1.57
SYNE2-210ENST00000553455 TSPAN33Q86UF1 283 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 PALB2Q86YC2 1186 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 LINC00346Q8IVM7 164 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 TEX11Q8IYF3 940 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 IL17RCQ8NAC3 791 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 NEXN-AS1Q8NBZ9 246 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 DENND1AQ8TEH3 1009 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 TRIB2Q92519 343 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 NLRP4Q96MN2 994 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 ACOX2Q99424 681 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 NCAPGQ9BPX3 1015 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 TMEM79Q9BSE2 394 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 FOXP1Q9H334 677 aaPredicted RBP5.26□□□□□ -1.57
SYNE2-210ENST00000553455 WDR26Q9H7D7 661 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 GPR108Q9NPR9 543 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 HINT3Q9NQE9 182 aaKnown RBP5.26□□□□□ -1.57
SYNE2-210ENST00000553455 OR6C3Q9NZP0 311 aa5.26□□□□□ -1.57
SYNE2-210ENST00000553455 COL3A1P02461 1466 aaPredicted RBP5.26□□□□□ -1.57
SYNE2-210ENST00000553455 WDR91A4D1P6 747 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 OR2A25A4D2G3 310 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms