RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 HSD3B7Q9H2F3 369 aa8.74□□□□□ -1.01
TMEM116-217ENST00000552801 DHX35Q9H5Z1 703 aaKnown RBP8.74□□□□□ -1.01
TMEM116-217ENST00000552801 WDR26Q9H7D7 661 aa8.74□□□□□ -1.01
TMEM116-217ENST00000552801 LOXL2Q9Y4K0 774 aa8.74□□□□□ -1.01
TMEM116-217ENST00000552801 PCDHGA7Q9Y5G6 932 aa8.74□□□□□ -1.01
TMEM116-217ENST00000552801 KIF26BQ2KJY2 2108 aa8.74□□□□□ -1.01
TMEM116-217ENST00000552801 ANKRD36A6QL64 1941 aa8.74□□□□□ -1.01
TMEM116-217ENST00000552801 EIF3CLB5ME19 914 aaKnown RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 INSIG1O15503 277 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 CELA2BP08218 269 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 LIPCP11150 499 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 SKILP12757 684 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 TNFAIP3P21580 790 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PSMA2P25787 234 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 KLK7P49862 253 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 ATP1A2P50993 1020 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 NDST2P52849 883 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 ILF3Q12906 894 aaKnown RBP eCLIP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 NFATC3Q12968 1075 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 ZNF235Q14590 738 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 KRT31Q15323 416 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 DENND2CQ68D51 928 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 XKR5Q6UX68 686 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 SRLQ86TD4 932 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PIM3Q86V86 326 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PHF13Q86YI8 300 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 CAMK1DQ8IU85 385 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 UMODL1-AS1Q8N2C9 162 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 ENOX1Q8TC92 643 aaKnown RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PDCD6IPQ8WUM4 868 aaKnown RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 CELF6Q96J87 481 aaKnown RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 EIF3CQ99613 913 aaKnown RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 AGPAT1Q99943 283 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 GSDMCQ9BYG8 508 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 GANQ9H2C0 597 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 L2HGDHQ9H9P8 463 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 CYP4F12Q9HCS2 524 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PHPT1Q9NRX4 125 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 KCTD5Q9NXV2 234 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 LRIT1Q9P2V4 623 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 LHX3Q9UBR4 397 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 FZD10Q9ULW2 581 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 AP4E1Q9UPM8 1137 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 GCN1Q92616 2671 aaKnown RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 A0A1W2PQ67 120 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 CFAP69A5D8W1 941 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 WASH4PA8MWX3 477 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 A8MX80 341 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 NTN3O00634 580 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PRPSAP2O60256 369 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PRAMEF11O60813 436 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 RECQL5O94762 991 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PRKCGP05129 697 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 UNGP13051 313 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 HGFP14210 728 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 FERP16591 822 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 CHRNB2P17787 502 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 ALDH4A1P30038 563 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 CCKBRP32239 447 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 MMP12P39900 470 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PAPOLAP51003 745 aaKnown RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 SCNN1BP51168 640 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 GSCP56915 257 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 JAM2P57087 298 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 KIAA1024LP59773 190 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 MYL5Q02045 173 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 RFTN1Q14699 578 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 AGERQ15109 404 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 NR6A1Q15406 480 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 CYTH1Q15438 398 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 AMZ1Q400G9 498 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 C14orf28Q4W4Y0 310 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PPP6R3Q5H9R7 873 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 B3GNT8Q7Z7M8 397 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 NDUFAF2Q8N183 169 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 SNRNP27Q8WVK2 155 aaKnown RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 TTC9Q92623 222 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 COL26A1Q96A83 441 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PDXPQ96GD0 296 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 RBM15Q96T37 977 aaKnown RBP eCLIP8.73□□□□□ -1.016e-7■■■■■ 27.1
TMEM116-217ENST00000552801 MAGEB5Q9BZ81 275 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 CARS2Q9HA77 564 aaKnown RBP8.73□□□□□ -1.01
TMEM116-217ENST00000552801 PARVAQ9NVD7 372 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 HAUS2Q9NVX0 235 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 SEPT3Q9UH03 358 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 DGKBQ9Y6T7 804 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 RNF215Q9Y6U7 377 aa8.73□□□□□ -1.01
TMEM116-217ENST00000552801 LRRK1Q38SD2 2015 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 UNC13CQ8NB66 2214 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 TSPAN11A1L157 253 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 PMS2P1A4D2B8 440 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 USP27XA6NNY8 438 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 TMCO5BA8MYB1 307 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 J3KR12 359 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 TNFRSF10CO14798 259 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 NVLO15381 856 aaKnown RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 CBFA2T2O43439 604 aa8.72□□□□□ -1.01
TMEM116-217ENST00000552801 NUDT21O43809 227 aaKnown RBP8.72□□□□□ -1.01
TMEM116-217ENST00000552801 ITGB2P05107 769 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms