RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 SLC4A1P02730 911 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 ALPIP09923 528 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 TAC1P20366 129 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 CRABP2P29373 138 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 FOXN2P32314 431 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 HNF1BP35680 557 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 HMGCLP35914 325 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 LTBRP36941 435 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 EIF2DP41214 584 aaKnown RBP12.7□□□□□ -0.38
CACNB3-223ENST00000552480 POU4F1Q01851 419 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 USP10Q14694 798 aaKnown RBP12.7□□□□□ -0.38
CACNB3-223ENST00000552480 TYSND1Q2T9J0 566 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 FASTKD1Q53R41 847 aaKnown RBP12.7□□□□□ -0.38
CACNB3-223ENST00000552480 TAF1BQ53T94 588 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-223ENST00000552480 PRPF38BQ5VTL8 546 aaKnown RBP12.7□□□□□ -0.38
CACNB3-223ENST00000552480 CNSTQ6PJW8 725 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 PARM1Q6UWI2 310 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 GDPD4Q6W3E5 623 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 EP400NLQ6ZTU2 488 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 MTSS1LQ765P7 747 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 SDCCAG8Q86SQ7 713 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-223ENST00000552480 CLEC14AQ86T13 490 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 LCA5Q86VQ0 697 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 ZSWIM9Q86XI8 627 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 SLC41A1Q8IVJ1 513 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 LRRC34Q8IZ02 419 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 ACVR1CQ8NER5 493 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 ST13P5Q8NFI4 369 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF473Q8WTR7 871 aaKnown RBP12.7□□□□□ -0.38
CACNB3-223ENST00000552480 MYLIPQ8WY64 445 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 NXPE3Q969Y0 559 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 NECTIN4Q96NY8 510 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 LYSMD1Q96S90 227 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 TTYH1Q9H313 450 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-223ENST00000552480 RABEP2Q9H5N1 569 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 INTS10Q9NVR2 710 aaKnown RBP12.7□□□□□ -0.38
CACNB3-223ENST00000552480 IL17CQ9P0M4 197 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 FKBPLQ9UIM3 349 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 CHD7Q9P2D1 2997 aa12.7□□□□□ -0.38
CACNB3-223ENST00000552480 TSPAN11A1L157 253 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 TCP11X1B4DZS4 312 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 PRRT4C9JH25 899 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 UGT2B4P06133 528 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 C2P06681 752 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 VIMP08670 466 aaKnown RBP12.69□□□□□ -0.38
CACNB3-223ENST00000552480 STMN1P16949 149 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 MC4RP32245 332 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 GJA4P35212 333 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 OPRD1P41143 372 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 SERPINB4P48594 390 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 STC1P52823 247 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 RAB10P61026 200 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 SEMA3AQ14563 771 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 GRIN2CQ14957 1233 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 PTPRRQ15256 657 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 ZKSCAN8Q15776 578 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-223ENST00000552480 DBN1Q16643 649 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 CDKN3Q16667 212 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF789Q5FWF6 425 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 PPM1JQ5JR12 505 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 AARS2Q5JTZ9 985 aaKnown RBP12.69□□□□□ -0.38
CACNB3-223ENST00000552480 N4BP2L1Q5TBK1 243 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-223ENST00000552480 BRAT1Q6PJG6 821 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 TPRG1Q6ZUI0 275 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 USP45Q70EL2 814 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 CPLX4Q7Z7G2 160 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 GPATCH11Q8N954 259 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 TERB1Q8NA31 727 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 ARMC2Q8NEN0 867 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 LRRC8CQ8TDW0 803 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 FGF14Q92915 247 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 TSPAN17Q96FV3 270 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 LRIG1Q96JA1 1093 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 MCCC1Q96RQ3 725 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-223ENST00000552480 TCF12Q99081 682 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 TRMT61BQ9BVS5 477 aaKnown RBP12.69□□□□□ -0.38
CACNB3-223ENST00000552480 OSBPL1AQ9BXW6 950 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 FAM107BQ9H098 131 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 ZFYVE1Q9HBF4 777 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-223ENST00000552480 EPS15L1Q9UBC2 864 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 IL36AQ9UHA7 158 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 TLK1Q9UKI8 766 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 EMCNQ9ULC0 261 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 WASF2Q9Y6W5 498 aa12.69□□□□□ -0.38
CACNB3-223ENST00000552480 A0A087X1B8 175 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 C1orf232A0A0U1RR37 186 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 EDDM13A0A1B0GTR0 161 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 PFDN6O15212 129 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 BIRC5O15392 142 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 PLIN3O60664 434 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 TOP3BO95985 862 aaKnown RBP12.68□□□□□ -0.38
CACNB3-223ENST00000552480 COL6A2P12110 1019 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 SAT1P21673 171 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 SP100P23497 879 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-223ENST00000552480 PMLP29590 882 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 GDI1P31150 447 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 SLC12A2P55011 1212 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 POLR2LP62875 67 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms