RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 YME1L1Q96TA2 773 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 AARSD1Q9BTE6 412 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 THTPAQ9BU02 230 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 ADGRE3Q9BY15 652 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 DCLRE1BQ9H816 532 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 POPDC3Q9HBV1 291 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 LHX3Q9UBR4 397 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 TYW5A2RUC4 315 aaKnown RBP14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 ANKRD66B4E2M5 251 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 PRSS56P0CW18 603 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 GNAZP19086 355 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 LPOP22079 712 aaPredicted RBP14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 EPHA3P29320 983 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 TRAF2Q12933 501 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 KLF10Q13118 480 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 LSM12Q3MHD2 195 aaKnown RBP14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 ACCSLQ4AC99 568 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 AFTPHQ6ULP2 937 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 ACAD11Q709F0 780 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 ISCA2Q86U28 154 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 WDR60Q8WVS4 1066 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 ALG14Q96F25 216 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 ZNF333Q96JL9 665 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 FAM161BQ96MY7 647 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 SMIM14Q96QK8 99 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 CCDC28BQ9BUN5 200 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 NUF2Q9BZD4 464 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 ZBP1Q9H171 429 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 ALG9Q9H6U8 611 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 CYP4F12Q9HCS2 524 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 VPS28Q9UK41 221 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 MTF2Q9Y483 593 aaPredicted RBP14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 DENND4CQ5VZ89 1909 aa14.02□□□□□ -0.16
RAB3IP-216ENST00000552199 MEI4A8MW99 385 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 F8W8V4 182 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 NEMP1O14524 444 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 TGM5O43548 720 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 ACRP10323 421 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 GABRR2P28476 465 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 CSKP41240 450 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 KCNC1P48547 511 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 ACSBG2Q5FVE4 666 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 ULK2Q8IYT8 1036 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 PAWRQ96IZ0 340 aaKnown RBP14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 PPP1R36Q96LQ0 422 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 TCF12Q99081 682 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 ZBED2Q9BTP6 218 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 OSBPL1AQ9BXW6 950 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 C11orf49Q9H6J7 331 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 DNMT3BQ9UBC3 853 aaKnown RBP14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 VPS51Q9UID3 782 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 CDYLQ9Y232 598 aa14.02□□□□□ -0.17
RAB3IP-216ENST00000552199 KIAA0355O15063 1070 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 FGF18O76093 207 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 PENKP01210 267 aaPredicted RBP14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 CNPP09543 421 aaKnown RBP14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 CTSAP10619 480 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 COX4I1P13073 169 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 HNRNPLP14866 589 aaKnown RBP eCLIP14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 CD1DP15813 335 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 IMPDH1P20839 514 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 CDC25CP30307 473 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 ABL2P42684 1182 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 CCNG1P51959 295 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 RHOAP61586 193 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 CYP4F8P98187 520 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 SLC25A3Q00325 362 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 SH2D4BQ5SQS7 431 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 GAREM2Q75VX8 874 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 NET1Q7Z628 596 aaPredicted RBP14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 CPSF7Q8N684 471 aaKnown RBP14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 CFAP61Q8NHU2 1237 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 WFDC5Q8TCV5 224 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 MRPS31Q92665 395 aaKnown RBP14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 PHF21BQ96EK2 531 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 EML4Q9HC35 981 aaKnown RBP14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 STK39Q9UEW8 545 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 LSM7Q9UK45 103 aaKnown RBP14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 C15orf41Q9Y2V0 281 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 PTPRSQ13332 1948 aa14.01□□□□□ -0.17
RAB3IP-216ENST00000552199 LOC100653049A0A140TA62 436 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 H0Y3Z8 333 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 KRT34O76011 436 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 JUNP05412 331 aaKnown RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 RAG1P15918 1043 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 SP100P23497 879 aaPredicted RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 CA8P35219 290 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 CDH18Q13634 790 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 PDCD2Q16342 344 aaPredicted RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 RALGPS1Q5JS13 557 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 HTR3DQ70Z44 454 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 HS6ST3Q8IZP7 471 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 TTC30BQ8N4P2 665 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 DCAF4L2Q8NA75 395 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 LPGAT1Q92604 370 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 PTERQ96BW5 349 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 FAR2Q96K12 515 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 CLPTM1LQ96KA5 538 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 LRRC3Q9BY71 257 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 ZNF385DQ9H6B1 395 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms