RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PRRT2Q7Z6L0 340 aaPredicted RBP5.55□□□□□ -1.52
CPSF6-206ENST00000550987 ANKRD23Q86SG2 305 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 OR52N4Q8NGI2 321 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 NEK9Q8TD19 979 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 SH3RF3Q8TEJ3 882 aaPredicted RBP5.55□□□□□ -1.52
CPSF6-206ENST00000550987 RADILQ96JH8 1075 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 PDLIM2Q96JY6 352 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 CNDP2Q96KP4 475 aaKnown RBP5.55□□□□□ -1.52
CPSF6-206ENST00000550987 NAP1L5Q96NT1 182 aaPredicted RBP5.55□□□□□ -1.52
CPSF6-206ENST00000550987 WDFY2Q96P53 400 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 TEFMQ96QE5 360 aaKnown RBP5.55□□□□□ -1.52
CPSF6-206ENST00000550987 MAP7D2Q96T17 732 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 BAG1Q99933 345 aaPredicted RBP5.55□□□□□ -1.52
CPSF6-206ENST00000550987 MMRN2Q9H8L6 949 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 CPNE5Q9HCH3 593 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 ATP8A2Q9NTI2 1148 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 SYBUQ9NX95 663 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 CTNNAL1Q9UBT7 734 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 INTS6Q9UL03 887 aaKnown RBP5.55□□□□□ -1.52
CPSF6-206ENST00000550987 MTMR6Q9Y217 621 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 CAPN7Q9Y6W3 813 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 LAMB1P07942 1786 aa5.55□□□□□ -1.52
CPSF6-206ENST00000550987 SPTAN1Q13813 2472 aaKnown RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 FRMD3A2A2Y4 597 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 DPPA5A6NC42 116 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 CXorf65A6NEN9 183 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 A8MV72 311 aaPredicted RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 LDLRAD4O15165 306 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 LIASO43766 372 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 KIF1CO43896 1103 aaKnown RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 ST6GAL1P15907 406 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 MRPL12P52815 198 aaKnown RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 ARSFP54793 590 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 RHAGQ02094 409 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 ITPK1Q13572 414 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 SEMA3AQ14563 771 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 SHHQ15465 462 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 CDSNQ15517 529 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 HIST2H2ACQ16777 129 aaPredicted RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 PLK5Q496M5 336 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 SOWAHCQ53LP3 525 aaPredicted RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 BMP2KLQ5H9B9 411 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 GKAP1Q5VSY0 366 aaPredicted RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 ZNF474Q6S9Z5 364 aaPredicted RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 CYB5R4Q7L1T6 521 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 KRT74Q7RTS7 529 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 IGFN1Q86VF2 1251 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 TICAM1Q8IUC6 712 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 ARHGAP12Q8IWW6 846 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 SAT2Q96F10 170 aaPredicted RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 ZNF503Q96F45 646 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 PKNOX2Q96KN3 472 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 C20orf173Q96LM9 149 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 FCRL5Q96RD9 977 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 FSD1Q9BTV5 496 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 TXLNGYQ9BZA5 131 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 NUF2Q9BZD4 464 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 SIL1Q9H173 461 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 POLR1BQ9H9Y6 1135 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 FOXJ2Q9P0K8 574 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 DLGAP2Q9P1A6 1054 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 FBXO40Q9UH90 709 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 MAGED1Q9Y5V3 778 aaPredicted RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 SESN1Q9Y6P5 492 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 VPS8Q8N3P4 1428 aa5.54□□□□□ -1.52
CPSF6-206ENST00000550987 DDX60LQ5H9U9 1706 aaKnown RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 EIF3AQ14152 1382 aaKnown RBP5.54□□□□□ -1.52
CPSF6-206ENST00000550987 POLR2AP24928 1970 aaKnown RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 UBR5O95071 2799 aaPredicted RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 TYW5A2RUC4 315 aaKnown RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 USP17L23D6RBM5 183 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 ERAL1O75616 437 aaKnown RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 IPO7O95373 1038 aaKnown RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 GARSP41250 739 aaKnown RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 DPP6P42658 865 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 GABRB2P47870 512 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 RARRES1P49788 294 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 TERF1P54274 439 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 AIMP2Q13155 320 aaKnown RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 RUNX2Q13950 521 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 PLCB4Q15147 1175 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 RASA2Q15283 850 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 C9orf50Q5SZB4 431 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 VWA5B1Q5TIE3 1220 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 TFAP2DQ7Z6R9 452 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 PRPF39Q86UA1 669 aaKnown RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 CCDC25Q86WR0 208 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 PAQR4Q8N4S7 273 aaPredicted RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 AMER2Q8N7J2 671 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 EXD3Q8N9H8 876 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 GABPB2Q8TAK5 448 aaPredicted RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 FAR1Q8WVX9 515 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 ZMAT2Q96NC0 199 aaKnown RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 BBS4Q96RK4 519 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 CXorf56Q9H5V9 222 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 ZCCHC17Q9NP64 241 aaKnown RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 IL17RBQ9NRM6 502 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 GRHL1Q9NZI5 618 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms