RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ZNF248Q8NDW4 579 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 RNF25Q96BH1 459 aaPredicted RBP13.49□□□□□ -0.25
NUP188-211ENST00000550219 ATXN7L3BQ96GX2 97 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 PBKQ96KB5 322 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 CSPG4P5Q96PW8 444 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 RNF157Q96PX1 679 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 CINPQ9BW66 212 aaPredicted RBP13.49□□□□□ -0.25
NUP188-211ENST00000550219 SLC39A8Q9C0K1 460 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 LRRC19Q9H756 370 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 SP110Q9HB58 689 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 PDFQ9HBH1 243 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 GULP1Q9UBP9 304 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 SNX12Q9UMY4 172 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 MFHAS1Q9Y4C4 1052 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 URB1O60287 2271 aaKnown RBP13.48□□□□□ -0.25
NUP188-211ENST00000550219 NBEAQ8NFP9 2946 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 EME2A4GXA9 379 aaPredicted RBP13.48□□□□□ -0.25
NUP188-211ENST00000550219 ARHGAP42A6NI28 874 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 CES2O00748 559 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 TPP1O14773 563 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 CASC3O15234 703 aaKnown RBP13.48□□□□□ -0.25
NUP188-211ENST00000550219 LZTS3O60299 673 aaPredicted RBP13.48□□□□□ -0.25
NUP188-211ENST00000550219 PRAMEF11O60813 436 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 CTSEP14091 401 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 CASQ1P31415 396 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 ARL4AP40617 200 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 PAPOLAP51003 745 aaKnown RBP13.48□□□□□ -0.25
NUP188-211ENST00000550219 YPEL5P62699 121 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 MMRN1Q13201 1228 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 UGP2Q16851 508 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 ALG11Q2TAA5 492 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 WSCD2Q2TBF2 565 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 TMEM52BQ4KMG9 183 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 ANKRD20A8PQ5CZ79 823 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 ZFYVE27Q5T4F4 411 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 ESRP1Q6NXG1 681 aaKnown RBP13.48□□□□□ -0.25
NUP188-211ENST00000550219 ENPP7Q6UWV6 458 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 RBM44Q6ZP01 1051 aaKnown RBP13.48□□□□□ -0.25
NUP188-211ENST00000550219 ZSWIM9Q86XI8 627 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 CAMK1DQ8IU85 385 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 KYQ8NBH2 561 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 PCDH19Q8TAB3 1148 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 KCNE4Q8WWG9 221 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 TSACCQ96A04 125 aaPredicted RBP13.48□□□□□ -0.25
NUP188-211ENST00000550219 ZNF578Q96N58 590 aaPredicted RBP13.48□□□□□ -0.25
NUP188-211ENST00000550219 OSBPL9Q96SU4 736 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 CCDC3Q9BQI4 270 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 BOCQ9BWV1 1114 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 CPEB1Q9BZB8 566 aaKnown RBP13.48□□□□□ -0.25
NUP188-211ENST00000550219 CLPBQ9H078 707 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 SUV39H2Q9H5I1 410 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 POLR1BQ9H9Y6 1135 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 WDR70Q9NW82 654 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 ATP8A1Q9Y2Q0 1164 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 OR1A2Q9Y585 309 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 LAMA5O15230 3695 aa13.48□□□□□ -0.25
NUP188-211ENST00000550219 COL27A1Q8IZC6 1860 aaPredicted RBP13.47□□□□□ -0.25
NUP188-211ENST00000550219 hCG_1818297A0A087WSY0 165 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 TSPAN11A1L157 253 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 PMS2P1A4D2B8 440 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 LMO7DNF2Z398 122 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 YY2O15391 372 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 TCP1P17987 556 aaKnown RBP13.47□□□□□ -0.25
NUP188-211ENST00000550219 SERPINA4P29622 427 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 MMP12P39900 470 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 LIG3P49916 1009 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 BLKP51451 505 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 NDST2P52849 883 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 SPIDRQ14159 915 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 GRM3Q14832 879 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 NFATC4Q14934 902 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 TFDP3Q5H9I0 405 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 BROXQ5VW32 411 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 AADACL2Q6P093 401 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 ARHGAP36Q6ZRI8 547 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 GPR155Q7Z3F1 870 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 LSMEM2Q8N112 164 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 RASGEF1CQ8N431 466 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 NPWQ8N729 165 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 PQLC3Q8N755 202 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 TSEN2Q8NCE0 465 aaKnown RBP13.47□□□□□ -0.25
NUP188-211ENST00000550219 NAT6Q93015 286 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 PDXPQ96GD0 296 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 ATP13A3Q9H7F0 1226 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 THSD1Q9NS62 852 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 DONSONQ9NYP3 566 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 TTC7AQ9ULT0 858 aaPredicted RBP13.47□□□□□ -0.25
NUP188-211ENST00000550219 ENTPD2Q9Y5L3 495 aa13.47□□□□□ -0.25
NUP188-211ENST00000550219 TOR1BO14657 336 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 RIOK3O14730 519 aaKnown RBP13.46□□□□□ -0.25
NUP188-211ENST00000550219 KLK10O43240 276 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 RASGRP1O95267 797 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 ERCC2P18074 760 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 AMPD1P23109 780 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 HTR1BP28222 390 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 RBMS1P29558 406 aaKnown RBP13.46□□□□□ -0.25
NUP188-211ENST00000550219 CETN2P41208 172 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 LSSP48449 732 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 SUOXP51687 545 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms